RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RBSNQ9H1K0 784 aa15.52■□□□□ 0.08
BEST1-208ENST00000534553 PRDM1O75626 825 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.07
BEST1-208ENST00000534553 USP17L8P0C7I0 530 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 CCDC192P0DO97 292 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 BAG6P46379 1132 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 EZH2Q15910 746 aaKnown RBP15.52■□□□□ 0.07
BEST1-208ENST00000534553 GRIK5Q16478 980 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 ADALQ6DHV7 355 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 LINC00301Q8NCQ3 95 aa15.52■□□□□ 0.07
BEST1-208ENST00000534553 FOXP1Q9H334 677 aaPredicted RBP15.52■□□□□ 0.07
BEST1-208ENST00000534553 PPFIA3O75145 1194 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 MMP1P03956 469 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 STK38Q15208 465 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 SF3A1Q15459 793 aaKnown RBP15.51■□□□□ 0.07
BEST1-208ENST00000534553 MSL1Q68DK7 614 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 ZNF444Q8N0Y2 327 aaPredicted RBP15.51■□□□□ 0.07
BEST1-208ENST00000534553 CLSTN2Q9H4D0 955 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 DACT1Q9NYF0 836 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
BEST1-208ENST00000534553 RIMBP2O15034 1052 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 PRPF3O43395 683 aaKnown RBP15.5■□□□□ 0.07
BEST1-208ENST00000534553 LIG1P18858 919 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 ME1P48163 572 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 RHBDL3P58872 404 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
BEST1-208ENST00000534553 OTUD7BQ6GQQ9 843 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 RBM43Q6ZSC3 357 aaKnown RBP15.5■□□□□ 0.07
BEST1-208ENST00000534553 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 PPP1R9BQ96SB3 815 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 MRIQ9BWK5 157 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 TNMDQ9H2S6 317 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
BEST1-208ENST00000534553 FLT1P17948 1338 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 DDX60LQ5H9U9 1706 aaKnown RBP15.5■□□□□ 0.07
BEST1-208ENST00000534553 CAVIN2O95810 425 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 TSPY3P0CV98 308 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 TSPY8P0CW00 308 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 CYP2D6P10635 497 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 GNAQP50148 359 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 HHIPL2Q6UWX4 724 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 KAT14Q9H8E8 782 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
BEST1-208ENST00000534553 SPTLC2O15270 562 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 PPP6R2O75170 966 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 TFAP4Q01664 338 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
BEST1-208ENST00000534553 FAM160A1Q05DH4 1040 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 RILPL1Q5EBL4 403 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 TMTC3Q6ZXV5 915 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 NOSTRINQ8IVI9 506 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
BEST1-208ENST00000534553 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
BEST1-208ENST00000534553 KIF28PB7ZC32 967 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 SMIM22K7EJ46 135 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
BEST1-208ENST00000534553 SLC39A14Q15043 492 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 STRIP1Q5VSL9 837 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
BEST1-208ENST00000534553 FAM177A1Q8N128 213 aaPredicted RBP15.48■□□□□ 0.07
BEST1-208ENST00000534553 MRPS27Q92552 414 aaKnown RBP15.48■□□□□ 0.07
BEST1-208ENST00000534553 AIFM3Q96NN9 605 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 BRMS1Q9HCU9 246 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 MYO3BQ8WXR4 1341 aa15.48■□□□□ 0.07
BEST1-208ENST00000534553 KINO60870 393 aaKnown RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 NR1I2O75469 434 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 FUT2Q10981 343 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 TEKT1Q969V4 418 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 TRIM44Q96DX7 344 aaPredicted RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 TTF2Q9UNY4 1162 aaKnown RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 RCSD1Q6JBY9 416 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 DIS3L2Q8IYB7 885 aaKnown RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 LZTS2Q9BRK4 669 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 PCDHA7Q9UN72 937 aa15.47■□□□□ 0.07
BEST1-208ENST00000534553 MORC2Q9Y6X9 1032 aaPredicted RBP15.47■□□□□ 0.07
BEST1-208ENST00000534553 TPRNQ4KMQ1 711 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 PNMA1Q8ND90 353 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 FBXW7Q969H0 707 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
BEST1-208ENST00000534553 GJB4Q9NTQ9 266 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 CEP131Q9UPN4 1083 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 CLIC4Q9Y696 253 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 C10orf71Q711Q0 1435 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 FOCADQ5VW36 1801 aa15.46■□□□□ 0.07
BEST1-208ENST00000534553 PLIN4Q96Q06 1357 aa15.46■□□□□ 0.06
BEST1-208ENST00000534553 RASA1P20936 1047 aa15.45■□□□□ 0.06
BEST1-208ENST00000534553 CDK8P49336 464 aa15.45■□□□□ 0.06
BEST1-208ENST00000534553 PLCD1P51178 756 aa15.45■□□□□ 0.06
BEST1-208ENST00000534553 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
BEST1-208ENST00000534553 CERS5Q8N5B7 392 aa15.45■□□□□ 0.06
BEST1-208ENST00000534553 NEDD1Q8NHV4 660 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms