RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 PRPF38BQ5VTL8 546 aaKnown RBP28.19■■■□□ 2.1
YIF1A-213ENST00000534374 EDC3Q96F86 508 aaKnown RBP28.19■■■□□ 2.1
YIF1A-213ENST00000534374 SMARCA5O60264 1052 aaPredicted RBP28.18■■■□□ 2.1
YIF1A-213ENST00000534374 FCGRTP55899 365 aa28.18■■■□□ 2.1
YIF1A-213ENST00000534374 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.18■■■□□ 2.1
YIF1A-213ENST00000534374 ZBTB21Q9ULJ3 1066 aa28.18■■■□□ 2.1
YIF1A-213ENST00000534374 OSBPP22059 807 aa28.17■■■□□ 2.1
YIF1A-213ENST00000534374 ADD2P35612 726 aa28.17■■■□□ 2.1
YIF1A-213ENST00000534374 USP17L10C9JJH3 530 aa28.16■■■□□ 2.1
YIF1A-213ENST00000534374 GDF11O95390 407 aa28.16■■■□□ 2.1
YIF1A-213ENST00000534374 SLC4A8Q2Y0W8 1093 aa28.16■■■□□ 2.1
YIF1A-213ENST00000534374 TMEM106CQ9BVX2 250 aa28.16■■■□□ 2.1
YIF1A-213ENST00000534374 ECHDC1Q9NTX5 307 aa28.16■■■□□ 2.1
YIF1A-213ENST00000534374 POTEFA5A3E0 1075 aa28.15■■■□□ 2.1
YIF1A-213ENST00000534374 POLR3DP05423 398 aaPredicted RBP28.15■■■□□ 2.1
YIF1A-213ENST00000534374 GCLCP48506 637 aaPredicted RBP28.15■■■□□ 2.1
YIF1A-213ENST00000534374 PLCD1P51178 756 aa28.15■■■□□ 2.1
YIF1A-213ENST00000534374 UBE3CQ15386 1083 aa28.15■■■□□ 2.1
YIF1A-213ENST00000534374 TMOD4Q9NZQ9 345 aa28.15■■■□□ 2.1
YIF1A-213ENST00000534374 BRCA2P51587 3418 aa28.15■■■□□ 2.1
YIF1A-213ENST00000534374 ZSWIM8A7E2V4 1837 aa28.14■■■□□ 2.1
YIF1A-213ENST00000534374 HOXA7P31268 230 aaPredicted RBP28.14■■■□□ 2.1
YIF1A-213ENST00000534374 RRP1P56182 461 aaKnown RBP28.14■■■□□ 2.1
YIF1A-213ENST00000534374 MTMR2Q13614 643 aa28.14■■■□□ 2.1
YIF1A-213ENST00000534374 CERKLQ49MI3 558 aaPredicted RBP28.14■■■□□ 2.1
YIF1A-213ENST00000534374 TAOK2Q9UL54 1235 aa28.14■■■□□ 2.1
YIF1A-213ENST00000534374 PCDHB15Q9Y5E8 787 aa28.14■■■□□ 2.1
YIF1A-213ENST00000534374 ECM2O94769 699 aaPredicted RBP28.13■■■□□ 2.09
YIF1A-213ENST00000534374 GH2P01242 217 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 FAM110CQ1W6H9 321 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 ZSCAN25Q6NSZ9 544 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 RAET1EQ8TD07 263 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 ASCC2Q9H1I8 757 aaPredicted RBP28.13■■■□□ 2.09
YIF1A-213ENST00000534374 DCP1AQ9NPI6 582 aaPredicted RBP28.13■■■□□ 2.09
YIF1A-213ENST00000534374 MCM9Q9NXL9 1143 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 MYPNQ86TC9 1320 aa28.13■■■□□ 2.09
YIF1A-213ENST00000534374 GABPAQ06546 454 aa28.12■■■□□ 2.09
YIF1A-213ENST00000534374 SHROOM1Q2M3G4 852 aaPredicted RBP28.12■■■□□ 2.09
YIF1A-213ENST00000534374 LCORLQ8N3X6 602 aa28.12■■■□□ 2.09
YIF1A-213ENST00000534374 ANKRD13CQ8N6S4 541 aa28.12■■■□□ 2.09
YIF1A-213ENST00000534374 LOC285556D6RIA3 1793 aa28.11■■■□□ 2.09
YIF1A-213ENST00000534374 SH3TC2Q8TF17 1288 aa28.11■■■□□ 2.09
YIF1A-213ENST00000534374 GPATCH3Q96I76 525 aa28.11■■■□□ 2.09
YIF1A-213ENST00000534374 ATP8A2Q9NTI2 1148 aa28.11■■■□□ 2.09
YIF1A-213ENST00000534374 MKI67P46013 3256 aaKnown RBP28.1■■■□□ 2.09
YIF1A-213ENST00000534374 GRK4P32298 578 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 SHMT1P34896 483 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 ABCB5Q2M3G0 1257 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 USP17L2Q6R6M4 530 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 SDR42E1Q8WUS8 393 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 ARMT1Q9H993 441 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 CABP5Q9NP86 173 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 MGAMO43451 1857 aa28.1■■■□□ 2.09
YIF1A-213ENST00000534374 DOCK3Q8IZD9 2030 aa28.09■■■□□ 2.09
YIF1A-213ENST00000534374 PRKCZQ05513 592 aa28.09■■■□□ 2.09
YIF1A-213ENST00000534374 TNPO2O14787 897 aaKnown RBP28.08■■■□□ 2.09
YIF1A-213ENST00000534374 MBD4O95243 580 aa28.08■■■□□ 2.09
YIF1A-213ENST00000534374 EN2P19622 333 aaPredicted RBP28.08■■■□□ 2.09
YIF1A-213ENST00000534374 IRX3P78415 501 aaPredicted RBP28.08■■■□□ 2.09
YIF1A-213ENST00000534374 SLFNL1Q499Z3 407 aa28.08■■■□□ 2.09
YIF1A-213ENST00000534374 EMILIN3Q9NT22 766 aa28.08■■■□□ 2.09
YIF1A-213ENST00000534374 RBBP6Q7Z6E9 1792 aaKnown RBP28.08■■■□□ 2.09
YIF1A-213ENST00000534374 COA7Q96BR5 231 aa28.07■■■□□ 2.08
YIF1A-213ENST00000534374 P2RX7Q99572 595 aaKnown RBP28.07■■■□□ 2.08
YIF1A-213ENST00000534374 GABRQQ9UN88 632 aa28.07■■■□□ 2.08
YIF1A-213ENST00000534374 FLT3LGP49771 235 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 USP14P54578 494 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 IRF5Q13568 498 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 RAB3GAP1Q15042 981 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 SLAIN1Q8ND83 568 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 C12orf42Q96LP6 360 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 MORF4L1Q9UBU8 362 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 SWAP70Q9UH65 585 aa28.06■■■□□ 2.08
YIF1A-213ENST00000534374 PRKAB2O43741 272 aa28.05■■■□□ 2.08
YIF1A-213ENST00000534374 KBTBD3Q8NAB2 608 aa28.05■■■□□ 2.08
YIF1A-213ENST00000534374 PXYLP1Q8TE99 480 aa28.05■■■□□ 2.08
YIF1A-213ENST00000534374 KIAA1683Q9H0B3 1180 aa28.05■■■□□ 2.08
YIF1A-213ENST00000534374 GTF3C2Q8WUA4 911 aaPredicted RBP28.04■■■□□ 2.08
YIF1A-213ENST00000534374 DDRGK1Q96HY6 314 aa28.04■■■□□ 2.08
YIF1A-213ENST00000534374 PUS7LQ9H0K6 701 aaKnown RBP28.04■■■□□ 2.08
YIF1A-213ENST00000534374 MYH7P12883 1935 aa28.04■■■□□ 2.08
YIF1A-213ENST00000534374 DDX60LQ5H9U9 1706 aaKnown RBP28.04■■■□□ 2.08
YIF1A-213ENST00000534374 TTC41PQ6P2S7 1318 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 CHGBP05060 677 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 GUCY1A2P33402 732 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 HERVK_113P62684 666 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 UBXN2AP68543 259 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 FEZ1Q99689 392 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 NAV1Q8NEY1 1877 aa28.03■■■□□ 2.08
YIF1A-213ENST00000534374 ADCY3O60266 1144 aa28.02■■■□□ 2.08
YIF1A-213ENST00000534374 MYCP01106 439 aaPredicted RBP28.02■■■□□ 2.08
YIF1A-213ENST00000534374 C12orf60Q5U649 245 aa28.02■■■□□ 2.08
YIF1A-213ENST00000534374 AMOTL1Q8IY63 956 aa28.02■■■□□ 2.08
YIF1A-213ENST00000534374 YTHDC1Q96MU7 727 aaKnown RBP28.02■■■□□ 2.08
YIF1A-213ENST00000534374 CRBNQ96SW2 442 aa28.02■■■□□ 2.08
YIF1A-213ENST00000534374 SLC4A4Q9Y6R1 1079 aa28.02■■■□□ 2.08
YIF1A-213ENST00000534374 USP17L15C9J2P7 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L13C9JLJ4 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L11C9JVI0 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L18D6R9N7 530 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms