RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 GOLIM4O00461 696 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 GRK4P32298 578 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 PRPF38BQ5VTL8 546 aaKnown RBP16.23■□□□□ 0.19
CAPN1-228ENST00000534373 SH3TC2Q8TF17 1288 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
CAPN1-228ENST00000534373 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
CAPN1-228ENST00000534373 PAG1Q9NWQ8 432 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 ZNF532Q9HCE3 1301 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 EN2P19622 333 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-228ENST00000534373 JAG1P78504 1218 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 IRF5Q13568 498 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 MTMR2Q13614 643 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 ANKRD13CQ8N6S4 541 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 SLAIN1Q8ND83 568 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 HAUS7Q99871 368 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.194e-8■■■■□ 22.5
CAPN1-228ENST00000534373 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-228ENST00000534373 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
CAPN1-228ENST00000534373 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
CAPN1-228ENST00000534373 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-228ENST00000534373 UBXN2AP68543 259 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 PRKCZQ05513 592 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-228ENST00000534373 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 BOLA2Q9H3K6 86 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 DCTPP1Q9H773 170 aa16.21■□□□□ 0.19
CAPN1-228ENST00000534373 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
CAPN1-228ENST00000534373 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 MYH1P12882 1939 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 GDF11O95390 407 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 POLR3DP05423 398 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-228ENST00000534373 CAPN2P17655 700 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 ADD2P35612 726 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 PLCD1P51178 756 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
CAPN1-228ENST00000534373 MKI67P46013 3256 aaKnown RBP16.19■□□□□ 0.18
CAPN1-228ENST00000534373 GH2P01242 217 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-228ENST00000534373 GABPAQ06546 454 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L2Q6R6M4 530 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 GTF3C2Q8WUA4 911 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-228ENST00000534373 DCP1AQ9NPI6 582 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-228ENST00000534373 ATP8A2Q9NTI2 1148 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 MORF4L1Q9UBU8 362 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
CAPN1-228ENST00000534373 MGAMO43451 1857 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 GJB1P08034 283 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 USP14P54578 494 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 EDC3Q96F86 508 aaKnown RBP16.18■□□□□ 0.18
CAPN1-228ENST00000534373 C12orf42Q96LP6 360 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 BCL11AQ9H165 835 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CAPN1-228ENST00000534373 BIN2Q9UBW5 565 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-228ENST00000534373 SHMT1P34896 483 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 MTFR1Q15390 333 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-228ENST00000534373 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 P2RX7Q99572 595 aaKnown RBP16.17■□□□□ 0.18
CAPN1-228ENST00000534373 KIAA1683Q9H0B3 1180 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 SWAP70Q9UH65 585 aa16.17■□□□□ 0.18
CAPN1-228ENST00000534373 MYCP01106 439 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-228ENST00000534373 CCL5P13501 91 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 GJA8P48165 433 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 HERVK_113P62684 666 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 RNF208Q9H0X6 261 aa16.16■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-228ENST00000534373 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 DDRGK1Q96HY6 314 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 FEZ1Q99689 392 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 ARMT1Q9H993 441 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
CAPN1-228ENST00000534373 MBD4O95243 580 aa16.14■□□□□ 0.17
CAPN1-228ENST00000534373 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
CAPN1-228ENST00000534373 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
CAPN1-228ENST00000534373 RBPJLQ9UBG7 517 aa16.14■□□□□ 0.17
CAPN1-228ENST00000534373 MAPK4P31152 587 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms