RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
HIPK3-206ENST00000534262 TMEM201Q5SNT2 666 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 DIEXFQ68CQ4 756 aaKnown RBP5.88□□□□□ -1.47
HIPK3-206ENST00000534262 REC114Q7Z4M0 266 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 MCATQ8IVS2 390 aaKnown RBP5.88□□□□□ -1.47
HIPK3-206ENST00000534262 ANKRD13AQ8IZ07 590 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 GIMAP7Q8NHV1 300 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 DNAJC2Q99543 621 aaKnown RBP5.88□□□□□ -1.47
HIPK3-206ENST00000534262 SPON2Q9BUD6 331 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 DUSP23Q9BVJ7 150 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 ATG3Q9NT62 314 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 UBP1Q9NZI7 540 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 TJP2Q9UDY2 1190 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 ADAM30Q9UKF2 790 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 PCDHGB7Q9Y5F8 929 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 CORINQ9Y5Q5 1042 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 TLDC2A0PJX2 215 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 TLR3O15455 904 aaKnown RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 LEFTY1O75610 366 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 LRIG2O94898 1065 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 MED26O95402 600 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 PGRP06401 933 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 FAM87AP0C7U9 286 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 TNNI2P48788 182 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 PDE4BQ07343 736 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 EGFLAMQ63HQ2 1017 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 ZNF765Q7L2R6 523 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 ARMCX6Q7L4S7 300 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 KIAA0825Q8IV33 1275 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 SLITRK4Q8IW52 837 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 ZNF654Q8IZM8 581 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 METTL22Q9BUU2 404 aaPredicted RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 CHMP4AQ9BY43 222 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 FOXQ1Q9C009 403 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 CCSER2Q9H7U1 834 aa5.87□□□□□ -1.47
HIPK3-206ENST00000534262 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.87□□□□□ -1.47
HIPK3-206ENST00000534262 ANKRD62A6NC57 917 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 CST3P01034 146 aaPredicted RBP5.86□□□□□ -1.47
HIPK3-206ENST00000534262 PLCG1P19174 1290 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
HIPK3-206ENST00000534262 CCDC144BQ3MJ40 725 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 CYP27C1Q4G0S4 372 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 ZMYM1Q5SVZ6 1142 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 SLC6A19Q695T7 634 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 MFSD2AQ8NA29 543 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 PIF1Q9H611 641 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 BRMS1Q9HCU9 246 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 PIM2Q9P1W9 311 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 LEMD3Q9Y2U8 911 aa5.86□□□□□ -1.47
HIPK3-206ENST00000534262 GRIN3BO60391 1043 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 SLITRK5O94991 958 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 ATE1O95260 518 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 EOMESO95936 686 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 FGRP09769 529 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 FOSL1P15407 271 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 ATP2B1P20020 1258 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 HOXA10P31260 410 aaPredicted RBP5.85□□□□□ -1.47
HIPK3-206ENST00000534262 GJA8P48165 433 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 CD97P48960 835 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 APOBRQ0VD83 1088 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 INTS5Q6P9B9 1019 aaKnown RBP5.85□□□□□ -1.47
HIPK3-206ENST00000534262 REXO1Q8N1G1 1221 aaKnown RBP5.85□□□□□ -1.47
HIPK3-206ENST00000534262 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 RIN3Q8TB24 985 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 NKD1Q969G9 470 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 TMEM87BQ96K49 555 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 HEXIM2Q96MH2 286 aaKnown RBP5.85□□□□□ -1.47
HIPK3-206ENST00000534262 EHMT1Q9H9B1 1298 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 REV1Q9UBZ9 1251 aa5.85□□□□□ -1.47
HIPK3-206ENST00000534262 UPK3BL1B0FP48 263 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 UPK3BL2E5RIL1 263 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 COBLO75128 1261 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 HTR3BO95264 441 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 SEZ6Q53EL9 994 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 PRAMEF13Q5VWM6 474 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 CAPN10Q9HC96 672 aa5.84□□□□□ -1.47
HIPK3-206ENST00000534262 TMA7Q9Y2S6 64 aaKnown RBP5.84□□□□□ -1.47
HIPK3-206ENST00000534262 CNTNAP4Q9C0A0 1308 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 CHURC1-FNTBB4DL54 471 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 CYP26A1O43174 497 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 DNAJA2O60884 412 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 CLCQ05315 142 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 ZNF746Q6NUN9 644 aaPredicted RBP5.83□□□□□ -1.48
HIPK3-206ENST00000534262 MCF2L2Q86YR7 1114 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 PCDHB14Q9Y5E9 798 aa5.83□□□□□ -1.48
HIPK3-206ENST00000534262 SBNO2Q9Y2G9 1366 aa5.82□□□□□ -1.48
HIPK3-206ENST00000534262 SLC22A31A6NKX4 558 aa5.82□□□□□ -1.48
HIPK3-206ENST00000534262 KIAA1324LA8MWY0 1029 aaPredicted RBP5.82□□□□□ -1.48
HIPK3-206ENST00000534262 IGF2BP3O00425 579 aaKnown RBP eCLIP5.82□□□□□ -1.48
HIPK3-206ENST00000534262 HYAL3O43820 417 aaPredicted RBP5.82□□□□□ -1.48
HIPK3-206ENST00000534262 SSTR4P31391 388 aa5.82□□□□□ -1.48
HIPK3-206ENST00000534262 ZNF165P49910 485 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms