RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 NMT2O60551 498 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 HLA-DOAP06340 250 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.63
RTL1-201ENST00000534062 PTGER2P43116 358 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.63
RTL1-201ENST00000534062 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 CIAPIN1Q6FI81 312 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 TMEM87BQ96K49 555 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 FLT1P17948 1338 aa11.15□□□□□ -0.63
RTL1-201ENST00000534062 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 EIF6P56537 245 aaKnown RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 ZNF287Q9HBT7 754 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 BAZ2AQ9UIF9 1905 aaKnown RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 PTPDC1A2A3K4 754 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 STX6O43752 255 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 DDIT3P35638 169 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 NFIAQ12857 509 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 CSPP1Q1MSJ5 1256 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
RTL1-201ENST00000534062 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 SYT1P21579 422 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 PPP4CP60510 307 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
RTL1-201ENST00000534062 WDR33Q9C0J8 1336 aaKnown RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 CXCL9Q07325 125 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 PDCP20941 246 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 RHBDL3P58872 404 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 ORC3Q9UBD5 711 aaPredicted RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 CHD4Q14839 1912 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 MYO1BO43795 1136 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 APOA5Q6Q788 366 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 PHKBQ93100 1093 aa11.13□□□□□ -0.63
RTL1-201ENST00000534062 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
RTL1-201ENST00000534062 CCDC88AQ3V6T2 1871 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 PFKFB2O60825 505 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 HHIPL2Q6UWX4 724 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 KAT14Q9H8E8 782 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 DDX4Q9NQI0 724 aaKnown RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 ZMYM6O95789 1325 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 NFKBIEO00221 500 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 RTN1Q16799 776 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 ZKSCAN5Q9Y2L8 839 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 CDK8P49336 464 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 APOBEC3HQ6NTF7 200 aaKnown RBP11.12□□□□□ -0.63
RTL1-201ENST00000534062 LY9Q9HBG7 655 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
RTL1-201ENST00000534062 GAKO14976 1311 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 TNIP1Q15025 636 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 GPR162Q16538 588 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 TRIM29Q14134 588 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 FIBPO43427 364 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 CEBPZQ03701 1054 aaKnown RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
RTL1-201ENST00000534062 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
RTL1-201ENST00000534062 TBC1D10BQ4KMP7 808 aaPredicted RBP11.1□□□□□ -0.63
RTL1-201ENST00000534062 FAM173BQ6P4H8 233 aa11.1□□□□□ -0.63
RTL1-201ENST00000534062 TRIM22Q8IYM9 498 aa11.1□□□□□ -0.63
RTL1-201ENST00000534062 ENAHQ8N8S7 591 aaPredicted RBP11.1□□□□□ -0.63
RTL1-201ENST00000534062 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
RTL1-201ENST00000534062 DOCK2Q92608 1830 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms