RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 A0A0G2JLL6 359 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-227ENST00000533909 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 USP17L21D6R901 530 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 M0R2C6 588 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 PDHXO00330 501 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 GH2P01242 217 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 CYP2D6P10635 497 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 DGKZQ13574 1117 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
CAPN1-227ENST00000533909 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
CAPN1-227ENST00000533909 PRRT2Q7Z6L0 340 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-227ENST00000533909 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-227ENST00000533909 LAMB1P07942 1786 aa16.03■□□□□ 0.16
CAPN1-227ENST00000533909 ZMYM1Q5SVZ6 1142 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 TATDN1Q6P1N9 297 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 PARK7Q99497 189 aaKnown RBP16.02■□□□□ 0.16
CAPN1-227ENST00000533909 FEZ1Q99689 392 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 SIPA1L1O43166 1804 aa16.02■□□□□ 0.16
CAPN1-227ENST00000533909 CYP2D7A0A087X1C5 515 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-227ENST00000533909 SHMT1P34896 483 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 HMGCS2P54868 508 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 PABPC4Q13310 644 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPN1-227ENST00000533909 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
CAPN1-227ENST00000533909 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 OSBPL3Q9H4L5 887 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
CAPN1-227ENST00000533909 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
CAPN1-227ENST00000533909 SP3Q02447 781 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 MTMR2Q13614 643 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 KIF22Q14807 665 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 ARHGEF6Q15052 776 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
CAPN1-227ENST00000533909 SMCR8Q8TEV9 937 aaPredicted RBP16■□□□□ 0.15
CAPN1-227ENST00000533909 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 SEC62Q99442 399 aaKnown RBP16■□□□□ 0.15
CAPN1-227ENST00000533909 PNMA3Q9UL41 463 aa16■□□□□ 0.15
CAPN1-227ENST00000533909 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
CAPN1-227ENST00000533909 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 TLR2O60603 784 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
CAPN1-227ENST00000533909 BACE1P56817 501 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 GABPAQ06546 454 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-227ENST00000533909 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 MCOLN1Q9GZU1 580 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 NAPBQ9H115 298 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 DIAPH3Q9NSV4 1193 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
CAPN1-227ENST00000533909 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
CAPN1-227ENST00000533909 C19orf81C9J6K1 198 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 HIP1O00291 1037 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 CDK8P49336 464 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
CAPN1-227ENST00000533909 JAG1P78504 1218 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 EVX2Q03828 476 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 MOGSQ13724 837 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 GPAT2Q6NUI2 795 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 SLC45A1Q9Y2W3 748 aa15.98■□□□□ 0.15
CAPN1-227ENST00000533909 CAPN15O75808 1086 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 CYP2C8P10632 490 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 OSBPP22059 807 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-227ENST00000533909 PKN2Q16513 984 aaKnown RBP15.97■□□□□ 0.15
CAPN1-227ENST00000533909 MCMDC2Q4G0Z9 681 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 TMEM179Q6ZVK1 233 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 IFNL3Q8IZI9 196 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
CAPN1-227ENST00000533909 PHIPQ8WWQ0 1821 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 PDE4AP27815 886 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 USP14P54578 494 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 IRX3P78415 501 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-227ENST00000533909 SEPT2Q15019 361 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.15
CAPN1-227ENST00000533909 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
CAPN1-227ENST00000533909 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms