RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 SPC24Q8NBT2 197 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 LRRN4CLQ8ND94 238 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CNNM1Q9NRU3 951 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CLIP2Q9UDT6 1046 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CD44P16070 742 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 RNF26Q9BY78 433 aaPredicted RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 XPO4Q9C0E2 1151 aaKnown RBP8.28□□□□□ -1.08
RNPC3-209ENST00000533834 ANO10Q9NW15 660 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 PLIN4Q96Q06 1357 aa8.28□□□□□ -1.08
RNPC3-209ENST00000533834 BTBD18B2RXH4 712 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 ZBTB43O43298 467 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 PRPF3O43395 683 aaKnown RBP8.27□□□□□ -1.08
RNPC3-209ENST00000533834 CRY2Q49AN0 593 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 PDXDC2PQ6P474 469 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.08
RNPC3-209ENST00000533834 SAMD1Q6SPF0 538 aaPredicted RBP8.27□□□□□ -1.08
RNPC3-209ENST00000533834 BICD2Q8TD16 824 aa8.27□□□□□ -1.08
RNPC3-209ENST00000533834 SEMA3EO15041 775 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 GABBR2O75899 941 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 GYG1P46976 350 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 DYNLL1P63167 89 aaKnown RBP8.27□□□□□ -1.09
RNPC3-209ENST00000533834 NR5A1Q13285 461 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 PNOCQ13519 176 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 DDB1Q16531 1140 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 SDR42E1Q8WUS8 393 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 KRT23Q9C075 422 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 NARFQ9UHQ1 456 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 MAN1B1Q9UKM7 699 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 DHX16O60231 1041 aaKnown RBP8.27□□□□□ -1.09
RNPC3-209ENST00000533834 FOSBP53539 338 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 ZNF654Q8IZM8 581 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 SRBD1Q8N5C6 995 aaKnown RBP8.27□□□□□ -1.09
RNPC3-209ENST00000533834 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
RNPC3-209ENST00000533834 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
RNPC3-209ENST00000533834 TMEM232C9JQI7 657 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 IGSF3O75054 1194 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 PLEKHA8P1O95397 391 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 PCP11498 1178 aaKnown RBP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 VSTM4Q8IW00 320 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 CHMP4CQ96CF2 233 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 ZNF446Q9NWS9 450 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 TNKSO95271 1327 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 XDHP47989 1333 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 CYP2D7A0A087X1C5 515 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 SMTNL1A8MU46 457 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 MYO1BO43795 1136 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 IDH1O75874 414 aaKnown RBP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 TMTC3Q6ZXV5 915 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 FLT1P17948 1338 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 PPP1R3GB7ZBB8 358 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 ME1P48163 572 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 MECOMQ03112 1051 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 NAA30Q147X3 362 aaPredicted RBP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 NR1I3Q14994 352 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 TMEM67Q5HYA8 995 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 PPP1R13BQ96KQ4 1090 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 NIP7Q9Y221 180 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNPC3-209ENST00000533834 FAM205AQ6ZU69 1335 aa8.26□□□□□ -1.09
RNPC3-209ENST00000533834 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 CCDC69A6NI79 296 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 TC2NQ8N9U0 490 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 ACSBG1Q96GR2 724 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 KCNJ14Q9UNX9 436 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 PCDHA5Q9Y5H7 936 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 NEMFO60524 1076 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 DEXIO95424 95 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 MARCKSP29966 332 aaPredicted RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 ATP2C1P98194 919 aaPredicted RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 MAP3K12Q12852 859 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 CMTR1Q8N1G2 835 aaKnown RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 CDC5LQ99459 802 aaKnown RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 SLC4A4Q9Y6R1 1079 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 A0A1B0GTH6 734 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 LRRC10BA6NIK2 292 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 CYTH3O43739 400 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 ZSCAN20P17040 1043 aaPredicted RBP8.25□□□□□ -1.09
RNPC3-209ENST00000533834 PPP2R5BQ15173 497 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 MICU3Q86XE3 530 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 KIF3AQ9Y496 699 aa8.25□□□□□ -1.09
RNPC3-209ENST00000533834 VWA3AA6NCI4 1184 aa8.24□□□□□ -1.09
RNPC3-209ENST00000533834 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
RNPC3-209ENST00000533834 GOLGA8AA7E2F4 631 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms