RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CDK5RAP2Q96SN8 1893 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
CHKA-207ENST00000533728 HAND2P61296 217 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
CHKA-207ENST00000533728 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 AKNAD1Q5T1N1 836 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 FBXO18Q8NFZ0 1043 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
CHKA-207ENST00000533728 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 NAPBQ9H115 298 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
CHKA-207ENST00000533728 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 CPLX1O14810 134 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 MBD4O95243 580 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 YEATS4O95619 227 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 SLC10A3P09131 477 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 NOM1Q5C9Z4 860 aaKnown RBP11.24□□□□□ -0.61
CHKA-207ENST00000533728 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 CNBD1Q8NA66 436 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 PGBD1Q96JS3 809 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
CHKA-207ENST00000533728 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
CHKA-207ENST00000533728 ORC3Q9UBD5 711 aaPredicted RBP11.24□□□□□ -0.61
CHKA-207ENST00000533728 NOL7Q9UMY1 257 aaKnown RBP11.24□□□□□ -0.61
CHKA-207ENST00000533728 FKTNO75072 461 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 APPP05067 770 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 PDE6BP35913 854 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 BCAMP50895 628 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
CHKA-207ENST00000533728 SART3Q15020 963 aaKnown RBP11.23□□□□□ -0.61
CHKA-207ENST00000533728 CRY2Q49AN0 593 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 APOA5Q6Q788 366 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
CHKA-207ENST00000533728 CNKSR1Q969H4 720 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 TNMDQ9H2S6 317 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
CHKA-207ENST00000533728 MINPP1Q9UNW1 487 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 NAV1Q8NEY1 1877 aa11.23□□□□□ -0.61
CHKA-207ENST00000533728 ZBTB43O43298 467 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
CHKA-207ENST00000533728 TPM3P06753 285 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 FGRP09769 529 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 LIG1P18858 919 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHKA-207ENST00000533728 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
CHKA-207ENST00000533728 ST5P78524 1137 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 CYB5R4Q7L1T6 521 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 FAM200AQ8TCP9 573 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 KCNG4Q8TDN1 519 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 WASF1Q92558 559 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 ARMC5Q96C12 935 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 LY9Q9HBG7 655 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
CHKA-207ENST00000533728 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
CHKA-207ENST00000533728 TRIM17Q9Y577 477 aa11.22□□□□□ -0.61
CHKA-207ENST00000533728 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 COL1A1P02452 1464 aaPredicted RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 NEDD4P46934 1319 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 B4E1Z4 1266 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 KDM4AO75164 1064 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 SRGNP10124 158 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 GTF2E1P29083 439 aaPredicted RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 HOXA10P31260 410 aaPredicted RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 ADALQ6DHV7 355 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 STYK1Q6J9G0 422 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 FAM173BQ6P4H8 233 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 C15orf52Q6ZUT6 534 aaKnown RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 CHST3Q7LGC8 479 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 ARMT1Q9H993 441 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 DACT1Q9NYF0 836 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 USP25Q9UHP3 1055 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 NAP1L2Q9ULW6 460 aaPredicted RBP11.21□□□□□ -0.61
CHKA-207ENST00000533728 ZKSCAN5Q9Y2L8 839 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 SLC4A4Q9Y6R1 1079 aa11.21□□□□□ -0.61
CHKA-207ENST00000533728 MAGEB6P1A0A0J9YX57 407 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms