RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CRBNQ96SW2 442 aa26.89■■□□□ 1.9
BEST1-207ENST00000533521 BCL11AQ9H165 835 aa26.89■■□□□ 1.9
BEST1-207ENST00000533521 DCP1AQ9NPI6 582 aaPredicted RBP26.89■■□□□ 1.9
BEST1-207ENST00000533521 JAG1P78504 1218 aa26.88■■□□□ 1.89
BEST1-207ENST00000533521 HDAC1Q13547 482 aaPredicted RBP26.88■■□□□ 1.89
BEST1-207ENST00000533521 LCORLQ8N3X6 602 aa26.88■■□□□ 1.89
BEST1-207ENST00000533521 KBTBD3Q8NAB2 608 aa26.88■■□□□ 1.89
BEST1-207ENST00000533521 MGAMO43451 1857 aa26.87■■□□□ 1.89
BEST1-207ENST00000533521 RBBP6Q7Z6E9 1792 aaKnown RBP26.87■■□□□ 1.89
BEST1-207ENST00000533521 POLR3DP05423 398 aaPredicted RBP26.87■■□□□ 1.89
BEST1-207ENST00000533521 HOXA7P31268 230 aaPredicted RBP26.87■■□□□ 1.89
BEST1-207ENST00000533521 PSMC4P43686 418 aa26.87■■□□□ 1.89
BEST1-207ENST00000533521 PLCD1P51178 756 aa26.87■■□□□ 1.89
BEST1-207ENST00000533521 HMGCS2P54868 508 aa26.87■■□□□ 1.89
BEST1-207ENST00000533521 MCM9Q9NXL9 1143 aa26.87■■□□□ 1.89
BEST1-207ENST00000533521 USP17L10C9JJH3 530 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 GCLCP48506 637 aaPredicted RBP26.86■■□□□ 1.89
BEST1-207ENST00000533521 SOX10P56693 466 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 CERKLQ49MI3 558 aaPredicted RBP26.86■■□□□ 1.89
BEST1-207ENST00000533521 TREML2Q5T2D2 321 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 NBPF11Q86T75 865 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 SMCR8Q8TEV9 937 aaPredicted RBP26.86■■□□□ 1.89
BEST1-207ENST00000533521 GCC1Q96CN9 775 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 TRIM47Q96LD4 638 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 ARHGAP39Q9C0H5 1083 aa26.86■■□□□ 1.89
BEST1-207ENST00000533521 ERC2O15083 957 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 MBD4O95243 580 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 GDF11O95390 407 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 ZFYP08048 801 aaPredicted RBP26.85■■□□□ 1.89
BEST1-207ENST00000533521 ARMT1Q9H993 441 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 TMOD4Q9NZQ9 345 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 SRRDQ9UH36 339 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 ZSWIM8A7E2V4 1837 aa26.85■■□□□ 1.89
BEST1-207ENST00000533521 GH2P01242 217 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 OSBPP22059 807 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 SHMT1P34896 483 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 FCGRTP55899 365 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 MTMR2Q13614 643 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 LRRFIP1Q32MZ4 808 aaKnown RBP26.84■■□□□ 1.89
BEST1-207ENST00000533521 SDR42E1Q8WUS8 393 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 SWAP70Q9UH65 585 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 PTCH2Q9Y6C5 1203 aa26.84■■□□□ 1.89
BEST1-207ENST00000533521 GLRX3O76003 335 aaKnown RBP26.83■■□□□ 1.89
BEST1-207ENST00000533521 CTGFP29279 349 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 FAM110CQ1W6H9 321 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 ABCB5Q2M3G0 1257 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 DDRGK1Q96HY6 314 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 C12orf42Q96LP6 360 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 CABP5Q9NP86 173 aa26.83■■□□□ 1.89
BEST1-207ENST00000533521 FMNL1O95466 1100 aaPredicted RBP26.82■■□□□ 1.88
BEST1-207ENST00000533521 SLC9C1Q4G0N8 1177 aa26.82■■□□□ 1.88
BEST1-207ENST00000533521 USP17L2Q6R6M4 530 aa26.82■■□□□ 1.88
BEST1-207ENST00000533521 ZNF333Q96JL9 665 aa26.82■■□□□ 1.88
BEST1-207ENST00000533521 ASCC2Q9H1I8 757 aaPredicted RBP26.82■■□□□ 1.88
BEST1-207ENST00000533521 BAZ2AQ9UIF9 1905 aaKnown RBP26.81■■□□□ 1.88
BEST1-207ENST00000533521 SLC4A8Q2Y0W8 1093 aa26.81■■□□□ 1.88
BEST1-207ENST00000533521 GIMAP6Q6P9H5 292 aa26.81■■□□□ 1.88
BEST1-207ENST00000533521 APPBP2Q92624 585 aa26.81■■□□□ 1.88
BEST1-207ENST00000533521 KIAA1683Q9H0B3 1180 aa26.81■■□□□ 1.88
BEST1-207ENST00000533521 KIAA0100Q14667 2235 aaKnown RBP26.8■■□□□ 1.88
BEST1-207ENST00000533521 USP14P54578 494 aa26.8■■□□□ 1.88
BEST1-207ENST00000533521 SHROOM1Q2M3G4 852 aaPredicted RBP26.8■■□□□ 1.88
BEST1-207ENST00000533521 SLFNL1Q499Z3 407 aa26.8■■□□□ 1.88
BEST1-207ENST00000533521 AMOTL1Q8IY63 956 aa26.8■■□□□ 1.88
BEST1-207ENST00000533521 PI4K2BQ8TCG2 481 aa26.8■■□□□ 1.88
BEST1-207ENST00000533521 GTF3C2Q8WUA4 911 aaPredicted RBP26.8■■□□□ 1.88
BEST1-207ENST00000533521 PUS7LQ9H0K6 701 aaKnown RBP26.8■■□□□ 1.88
BEST1-207ENST00000533521 ZBTB47Q9UFB7 747 aaPredicted RBP26.8■■□□□ 1.88
BEST1-207ENST00000533521 SALL3Q9BXA9 1300 aa26.8■■□□□ 1.88
BEST1-207ENST00000533521 PRKAB2O43741 272 aa26.79■■□□□ 1.88
BEST1-207ENST00000533521 C12orf60Q5U649 245 aa26.79■■□□□ 1.88
BEST1-207ENST00000533521 STRBPQ96SI9 672 aaKnown RBP26.79■■□□□ 1.88
BEST1-207ENST00000533521 MORF4L1Q9UBU8 362 aa26.79■■□□□ 1.88
BEST1-207ENST00000533521 MYH8P13535 1937 aa26.78■■□□□ 1.88
BEST1-207ENST00000533521 TNRC18O15417 2968 aaPredicted RBP26.78■■□□□ 1.88
BEST1-207ENST00000533521 RNF113AO15541 343 aaKnown RBP26.78■■□□□ 1.88
BEST1-207ENST00000533521 MX1P20591 662 aa26.78■■□□□ 1.88
BEST1-207ENST00000533521 CCDC17Q96LX7 622 aa26.78■■□□□ 1.88
BEST1-207ENST00000533521 EMILIN3Q9NT22 766 aa26.78■■□□□ 1.88
BEST1-207ENST00000533521 SLC4A4Q9Y6R1 1079 aa26.78■■□□□ 1.88
BEST1-207ENST00000533521 MYPNQ86TC9 1320 aa26.77■■□□□ 1.88
BEST1-207ENST00000533521 IRX3P78415 501 aaPredicted RBP26.77■■□□□ 1.88
BEST1-207ENST00000533521 TICAM2Q86XR7 235 aa26.77■■□□□ 1.88
BEST1-207ENST00000533521 ANKRD13CQ8N6S4 541 aa26.77■■□□□ 1.88
BEST1-207ENST00000533521 STAP2Q9UGK3 403 aa26.77■■□□□ 1.88
BEST1-207ENST00000533521 USP17L12C9JPN9 530 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 USP17L21D6R901 530 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 CHGBP05060 677 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 GNAT2P19087 354 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 GUCY1A2P33402 732 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 IRF5Q13568 498 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 RAB3GAP1Q15042 981 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 SBK1Q52WX2 424 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 ANKRD45Q5TZF3 282 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 TSHZ3Q63HK5 1081 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 TMEM179Q6ZVK1 233 aa26.76■■□□□ 1.87
BEST1-207ENST00000533521 ARPP21Q9UBL0 812 aaPredicted RBP26.76■■□□□ 1.87
BEST1-207ENST00000533521 CENPFP49454 3210 aa26.75■■□□□ 1.87
BEST1-207ENST00000533521 RAET1EQ8TD07 263 aa26.75■■□□□ 1.87
BEST1-207ENST00000533521 OSBP2Q969R2 916 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms