RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 AK9Q5TCS8 1911 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 PPP1R12AO14974 1030 aaPredicted RBP8.71□□□□□ -1.02
CSRP1-218ENST00000533402 SLC5A1P13866 664 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 ORC3Q9UBD5 711 aaPredicted RBP8.71□□□□□ -1.02
CSRP1-218ENST00000533402 PSMA7O14818 248 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 MAN1A2O60476 641 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 CTNNA1P35221 906 aaKnown RBP8.71□□□□□ -1.02
CSRP1-218ENST00000533402 LRMPQ12912 555 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 DENND2CQ68D51 928 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 MGARPQ8TDB4 240 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 TRIM27P14373 513 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 ETF1P62495 437 aaKnown RBP8.71□□□□□ -1.02
CSRP1-218ENST00000533402 SLC4A8Q2Y0W8 1093 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 SULT6B1Q6IMI4 303 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 EYA3Q99504 573 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 MKNK2Q9HBH9 465 aa8.71□□□□□ -1.02
CSRP1-218ENST00000533402 ENO4A6NNW6 628 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 CLUL1Q15846 466 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 HHATQ5VTY9 493 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 RNF41Q9H4P4 317 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 CLCN6P51797 869 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ESRRGP62508 458 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 NBPF9Q3BBW0 867 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 GAS2L3Q86XJ1 694 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 CFAP61Q8NHU2 1237 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 BICD1Q96G01 975 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 SLC5A4Q9NY91 659 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ARHGAP42A6NI28 874 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 BAG6P46379 1132 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 TCIRG1Q13488 830 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 HIBCHQ6NVY1 386 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 G3BP2Q9UN86 482 aaKnown RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ADGRB3O60242 1522 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ARHGEF40Q8TER5 1519 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 RGS16O15492 202 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 MARCKSP29966 332 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 STX2P32856 288 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 FANCCQ00597 558 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 CCDC152Q4G0S7 254 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ST13P4Q8IZP2 240 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 TCP11L1Q9NUJ3 509 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 SLC12A7Q9Y666 1083 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 SPTLC2O15270 562 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 EVI5O60447 810 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 SDSP20132 328 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 UBA7P41226 1012 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 TAF7Q15545 349 aaPredicted RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 NYXQ9GZU5 481 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 NBPF10Q6P3W6 841 aaKnown RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 KIF2CQ99661 725 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 RNASE9P60153 205 aaKnown RBP8.7□□□□□ -1.02
CSRP1-218ENST00000533402 TRIM14Q14142 442 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 NUDCD3Q8IVD9 361 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 HOMER3Q9NSC5 361 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 HAUS2Q9NVX0 235 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 HMG20BQ9P0W2 317 aa8.7□□□□□ -1.02
CSRP1-218ENST00000533402 RIMBP3CA6NJZ7 1639 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RIMBP3BA6NNM3 1639 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RIMBP3Q9UFD9 1639 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 KCNA6P17658 529 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 CFAP221Q4G0U5 840 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 EIF2AQ9BY44 585 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 ADAM21Q9UKJ8 722 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TSC22D4Q9Y3Q8 395 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TACC3Q9Y6A5 838 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 SAR1BQ9Y6B6 198 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 SUN1O94901 812 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 APOEP02649 317 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RMDN2Q96LZ7 410 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 MRPL46Q9H2W6 279 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 CTTNBP2NLQ9P2B4 639 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 DIP2AQ14689 1571 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 ELF1P32519 619 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 MAP7D3Q8IWC1 876 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 PYCARDQ9ULZ3 195 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 EEF2P13639 858 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TRIM58Q8NG06 486 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 CCDC68Q9H2F9 335 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 I3L4J1 428 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 MAP3K7O43318 606 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TROVE2P10155 538 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TMPOP42166 694 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 KLHL29Q96CT2 875 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 NEK1Q96PY6 1258 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 ANKARQ7Z5J8 1434 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 FLOT1O75955 427 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RWDD2BP57060 319 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 CUL3Q13618 768 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 SEPT2Q15019 361 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 KCTD16Q68DU8 428 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms