RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 LAMA4Q16363 1823 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 KLF18A0A0U1RQI7 1052 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 TSPY2A6NKD2 308 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 H7C1D1 291 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 TFAP4Q01664 338 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 GABPAQ06546 454 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 STK3Q13188 491 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 NFXL1Q6ZNB6 911 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 ZFPM1Q8IX07 1006 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 TCP11L1Q9NUJ3 509 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 SERPINB13Q9UIV8 391 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 SMC3Q9UQE7 1217 aa14.39□□□□□ -0.11
TGFBR3-211ENST00000533370 PDIA4P13667 645 aaKnown RBP14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 RASA1P20936 1047 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 RCAN1P53805 252 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 CACNB3P54284 484 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 NUCB2P80303 420 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 TCP10Q12799 353 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 SEC23AQ15436 765 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 GPR162Q16538 588 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 SLC4A8Q2Y0W8 1093 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 FAM83AQ86UY5 434 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 ANKS1AQ92625 1134 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 ZNF541Q9H0D2 1346 aa14.38□□□□□ -0.11
TGFBR3-211ENST00000533370 STK25O00506 426 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 WNT10BO00744 389 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 TSPY3P0CV98 308 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 TSPY8P0CW00 308 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 SCRN1Q12765 414 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 PPP2R5BQ15173 497 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 C9orf131Q5VYM1 1079 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 MICALL2Q8IY33 904 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 NEDD1Q8NHV4 660 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 HPS5Q9UPZ3 1129 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 TNKSO95271 1327 aa14.37□□□□□ -0.11
TGFBR3-211ENST00000533370 ATRNL1Q5VV63 1379 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 CLRN2A0PK11 232 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 GOLGA8BA8MQT2 603 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 ZBTB43O43298 467 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 PYGBP11216 843 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 ST3GAL1Q11201 340 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 NBPF9Q3BBW0 867 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 IFIT1BQ5T764 474 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 SH3BP5LQ7L8J4 393 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 BAZ2AQ9UIF9 1905 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
TGFBR3-211ENST00000533370 CALM1P0DP23 149 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CALM2P0DP24 149 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CALM3P0DP25 149 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 TNNI2P48788 182 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CCT2P78371 535 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CATIPQ7Z7H3 387 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 SMARCC2Q8TAQ2 1214 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CCDC17Q96LX7 622 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 TRIM34Q9BYJ4 488 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 GPRC5DQ9NZD1 345 aa14.35□□□□□ -0.11
TGFBR3-211ENST00000533370 CCDC196A0A1B0GTZ2 297 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 SHTN1A0MZ66 631 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 PDCP20941 246 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 GJB2P29033 226 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 SHMT1P34896 483 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 METAP2P50579 478 aaKnown RBP eCLIP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 HMGN5P82970 282 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 TNFAIP1Q13829 316 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 DPY19L2Q6NUT2 758 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 CPLX2Q6PUV4 134 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 VEZTQ9HBM0 779 aa14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-211ENST00000533370 CPLX1O14810 134 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 TBC1D12O60347 775 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 NMT2O60551 498 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 CDKL5O76039 1030 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 NOVP48745 357 aa14.33□□□□□ -0.12
TGFBR3-211ENST00000533370 RAB3GAP1Q15042 981 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms