RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 SHMT1P34896 483 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 EPS15P42566 896 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 STK3Q13188 491 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 SART3Q15020 963 aaKnown RBP18.76■□□□□ 0.59
TRIM3-213ENST00000533309 FAM83AQ86UY5 434 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
TRIM3-213ENST00000533309 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
TRIM3-213ENST00000533309 GTF3C6Q969F1 213 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 PI4KBQ9UBF8 816 aa18.76■□□□□ 0.59
TRIM3-213ENST00000533309 TSPY2A6NKD2 308 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 PFKFB2O60825 505 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 TFAP4Q01664 338 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 IQCA1Q86XH1 822 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
TRIM3-213ENST00000533309 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 HPS5Q9UPZ3 1129 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 PLIN4Q96Q06 1357 aa18.75■□□□□ 0.59
TRIM3-213ENST00000533309 WTAPQ15007 396 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 APOA5Q6Q788 366 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 CDAN1Q8IWY9 1227 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
TRIM3-213ENST00000533309 TMEM39BQ9GZU3 492 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 IL17RBQ9NRM6 502 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 FAM196BA6NMK8 535 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 SCRN1Q12765 414 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 HACL1Q9UJ83 578 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
TRIM3-213ENST00000533309 SCN4AP35499 1836 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 ERICH2A1L162 156 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 GOLGA8BA8MQT2 603 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 TSPY3P0CV98 308 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 TSPY8P0CW00 308 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 HIRAP54198 1017 aaPredicted RBP18.73■□□□□ 0.59
TRIM3-213ENST00000533309 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
TRIM3-213ENST00000533309 NEDD1Q8NHV4 660 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
TRIM3-213ENST00000533309 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRIM3-213ENST00000533309 TCP11L1Q9NUJ3 509 aa18.73■□□□□ 0.59
TRIM3-213ENST00000533309 SCAF8Q9UPN6 1271 aaKnown RBP18.73■□□□□ 0.59
TRIM3-213ENST00000533309 AKR1B1P15121 316 aa18.72■□□□□ 0.59
TRIM3-213ENST00000533309 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
TRIM3-213ENST00000533309 NCOA5Q9HCD5 579 aaKnown RBP18.72■□□□□ 0.59
TRIM3-213ENST00000533309 NAP1L2Q9ULW6 460 aaPredicted RBP18.72■□□□□ 0.59
TRIM3-213ENST00000533309 NID2Q14112 1375 aa18.72■□□□□ 0.59
TRIM3-213ENST00000533309 MYH4Q9Y623 1939 aa18.72■□□□□ 0.59
TRIM3-213ENST00000533309 DTNBO60941 627 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 CCT2P78371 535 aaKnown RBP18.71■□□□□ 0.59
TRIM3-213ENST00000533309 TNFAIP1Q13829 316 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 RASA3Q14644 834 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 RAB11FIP4Q86YS3 637 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
TRIM3-213ENST00000533309 CCDC69A6NI79 296 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 LMOD1P29536 600 aaPredicted RBP18.71■□□□□ 0.58
TRIM3-213ENST00000533309 TNNI2P48788 182 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 IFIT1BQ5T764 474 aaKnown RBP18.71■□□□□ 0.58
TRIM3-213ENST00000533309 DPY19L2Q6NUT2 758 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 ANKS1AQ92625 1134 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 TEPSINQ96N21 525 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 MYL10Q9BUA6 226 aa18.71■□□□□ 0.58
TRIM3-213ENST00000533309 ADARB2Q9NS39 739 aaKnown RBP18.71■□□□□ 0.58
TRIM3-213ENST00000533309 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.71■□□□□ 0.58
TRIM3-213ENST00000533309 WDR90Q96KV7 1748 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 IGKV6D-41A0A0C4DH26 115 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 GLTPD2A6NH11 291 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 ZBTB43O43298 467 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 RXRAP19793 462 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 NOVP48745 357 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 ANGEL2Q5VTE6 544 aaKnown RBP18.7■□□□□ 0.58
TRIM3-213ENST00000533309 MICU3Q86XE3 530 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 ZNF654Q8IZM8 581 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
TRIM3-213ENST00000533309 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
TRIM3-213ENST00000533309 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
TRIM3-213ENST00000533309 GGA3Q9NZ52 723 aa18.69■□□□□ 0.58
TRIM3-213ENST00000533309 ATAD5Q96QE3 1844 aa18.69■□□□□ 0.58
TRIM3-213ENST00000533309 METAP2P50579 478 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 RCAN1P53805 252 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 RRP1BQ14684 758 aaKnown RBP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 CEP95Q96GE4 821 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 TRIM34Q9BYJ4 488 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 DEFB129Q9H1M3 183 aa18.68■□□□□ 0.58
TRIM3-213ENST00000533309 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 CIZ1Q9ULV3 898 aaPredicted RBP18.68■□□□□ 0.58
TRIM3-213ENST00000533309 TBC1D12O60347 775 aa18.67■□□□□ 0.58
TRIM3-213ENST00000533309 JAK2O60674 1132 aa18.67■□□□□ 0.58
TRIM3-213ENST00000533309 CDC27P30260 824 aa18.67■□□□□ 0.58
TRIM3-213ENST00000533309 MAP3K10Q02779 954 aa18.67■□□□□ 0.58
TRIM3-213ENST00000533309 TROAPQ12815 778 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms