RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CDK8P49336 464 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 GTF2A2P52657 109 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 MFAP1P55081 439 aaKnown RBP14.32□□□□□ -0.12
SSBP3-214ENST00000533209 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-214ENST00000533209 NAPBQ9H115 298 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 SWAP70Q9UH65 585 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 ZBTB21Q9ULJ3 1066 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
SSBP3-214ENST00000533209 ROBO3Q96MS0 1386 aa14.32□□□□□ -0.12
SSBP3-214ENST00000533209 TESPA1A2RU30 521 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-214ENST00000533209 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 GH2P01242 217 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 ASNSP08243 561 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
SSBP3-214ENST00000533209 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
SSBP3-214ENST00000533209 SREBF2Q12772 1141 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 CERKLQ49MI3 558 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-214ENST00000533209 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 AFG3L2Q9Y4W6 797 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 RAD50Q92878 1312 aa14.31□□□□□ -0.12
SSBP3-214ENST00000533209 DOCK1Q14185 1865 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 USP17L5A8MUK1 530 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 FGAP02671 866 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 GUCY1A2P33402 732 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 INHBEP58166 350 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 PPARAQ07869 468 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 CCL15Q16663 113 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 RUFY2Q8WXA3 655 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 PTPN18Q99952 460 aa14.3□□□□□ -0.12
SSBP3-214ENST00000533209 IGF2BP3O00425 579 aaKnown RBP eCLIP14.29□□□□□ -0.12
SSBP3-214ENST00000533209 CXCL11O14625 94 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 CETPP11597 493 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 MOGSQ13724 837 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 WDR18Q9BV38 432 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 RNF186Q9NXI6 227 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 ANAPC4Q9UJX5 808 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
SSBP3-214ENST00000533209 A0A0G2JLL6 359 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-214ENST00000533209 TRIM75PA6NK02 468 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 FOXN1O15353 648 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 SGSM2O43147 1006 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 AKR1B1P15121 316 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 RASA1P20936 1047 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 CTDSPL2Q05D32 466 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 SPP2Q13103 211 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 PRRT2Q7Z6L0 340 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-214ENST00000533209 ZNF280CQ8ND82 737 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 CABP5Q9NP86 173 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 TACC3Q9Y6A5 838 aa14.28□□□□□ -0.12
SSBP3-214ENST00000533209 LAMB1P07942 1786 aa14.27□□□□□ -0.12
SSBP3-214ENST00000533209 BTBD19C9JJ37 291 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
SSBP3-214ENST00000533209 CA12O43570 354 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 TRPA1O75762 1119 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 SEPT2Q15019 361 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 MKNK2Q9HBH9 465 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 AS3MTQ9HBK9 375 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
SSBP3-214ENST00000533209 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSBP3-214ENST00000533209 PRDM1O75626 825 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
SSBP3-214ENST00000533209 PTH1RQ03431 593 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 GPAT2Q6NUI2 795 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 TMEM179Q6ZVK1 233 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 ESYT1Q9BSJ8 1104 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
SSBP3-214ENST00000533209 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 TSKSQ9UJT2 592 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
SSBP3-214ENST00000533209 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 USP17L10C9JJH3 530 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 CDC45O75419 566 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 ALDH1A1P00352 501 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 FGRP09769 529 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
SSBP3-214ENST00000533209 HMGCS2P54868 508 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 BACE1P56817 501 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 HAND2P61296 217 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 PDE4BQ07343 736 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 MTMR2Q13614 643 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 SH3D19Q5HYK7 790 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 OTUD7BQ6GQQ9 843 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 FASTKD5Q7L8L6 764 aaKnown RBP14.25□□□□□ -0.13
SSBP3-214ENST00000533209 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
SSBP3-214ENST00000533209 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms