RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 IFT88Q13099 833 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 MAP7D3Q8IWC1 876 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 CCDC63Q8NA47 563 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 FAM71BQ8TC56 605 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 AATFQ9NY61 560 aaKnown RBP eCLIP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 NMIQ13287 307 aaPredicted RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 GPR161Q8N6U8 529 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 SPAG5Q96R06 1193 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 EYA1Q99502 592 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 SPZ1Q9BXG8 430 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 SLC26A6Q9BXS9 759 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 TFCP2L1Q9NZI6 479 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 BASP1P80723 227 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 TSPY1Q01534 308 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 PSMD6Q15008 389 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 TCP11Q8WWU5 503 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 RAB3IPQ96QF0 476 aaPredicted RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 FERMT1Q9BQL6 677 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 STMN4Q9H169 189 aaPredicted RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 EHBP1Q8NDI1 1231 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 DDX21Q9NR30 783 aaKnown RBP eCLIP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 PPFIA1Q13136 1202 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 CFAP157Q5JU67 520 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 ZNF772Q68DY9 489 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 FAM167BQ9BTA0 163 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 USP16Q9Y5T5 823 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 ADGRL3Q9HAR2 1447 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 IARSP41252 1262 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 DMPKQ09013 629 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 DPH6Q7L8W6 267 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TRIM42Q8IWZ5 723 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 MCUR1Q96AQ8 359 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 MRGBPQ9NV56 204 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TLDC2A0PJX2 215 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 NOP2P46087 812 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 METAP2P50579 478 aaKnown RBP eCLIP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 VAV2P52735 878 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TYRO3Q06418 890 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 VSIG1Q86XK7 387 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TRIM58Q8NG06 486 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TSNARE1Q96NA8 513 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TMEM165Q9HC07 324 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 KCNK9Q9NPC2 374 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 MED4Q9NPJ6 270 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 MAP3K5Q99683 1374 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 NANOGNBQ7Z5D8 188 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 EGFL6Q8IUX8 553 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 UBLCP1Q8WVY7 318 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 FAN1Q9Y2M0 1017 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 TMA7Q9Y2S6 64 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 CYP7A1P22680 504 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 KIF5AQ12840 1032 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 BRD3Q15059 726 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 KLHL23Q8NBE8 558 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 GDAP1L1Q96MZ0 367 aa7.75□□□□□ -1.17
TGFBR3-210ENST00000533089 ATP7BP35670 1465 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 RIMBP2O15034 1052 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 STX6O43752 255 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 EEF2P13639 858 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 LMOD1P29536 600 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 UBA7P41226 1012 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 TPD52P55327 224 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 FAM98CQ17RN3 349 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 PPP1R21Q6ZMI0 780 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 FSIP1Q8NA03 581 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 TRPC5Q9UL62 973 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 HEATR3Q7Z4Q2 680 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 GAS2L3Q86XJ1 694 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 EVI5LQ96CN4 794 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 FGD4Q96M96 766 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 SH2B1Q9NRF2 756 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 SCINQ9Y6U3 715 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 FAM83GA6ND36 823 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 GIGYF1O75420 1035 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 ANXA1P04083 346 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 FNBP4Q8N3X1 1017 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 SSH1Q8WYL5 1049 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 AP1G2O75843 785 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 TAF12Q16514 161 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 NUDCD3Q8IVD9 361 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 ARHGAP18Q8N392 663 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 TFIP11Q9UBB9 837 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 NIP7Q9Y221 180 aaKnown RBP eCLIP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 NKTRP30414 1462 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 KRT75O95678 551 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 TMED10P49755 219 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 ZNF804AQ7Z570 1209 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 PROCA1Q8NCQ7 364 aaPredicted RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 ATP2A3Q93084 1043 aa7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 RNF17Q9BXT8 1623 aaKnown RBP7.74□□□□□ -1.17
TGFBR3-210ENST00000533089 CALM1P0DP23 149 aa7.73□□□□□ -1.17
TGFBR3-210ENST00000533089 CALM2P0DP24 149 aa7.73□□□□□ -1.17
TGFBR3-210ENST00000533089 CALM3P0DP25 149 aa7.73□□□□□ -1.17
TGFBR3-210ENST00000533089 PHLDB3Q6NSJ2 640 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms