RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 LRP2BPQ9P2M1 347 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 IGSF3O75054 1194 aa12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 FOSL2P15408 326 aa12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 FAM110CQ1W6H9 321 aa12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 PRKAG2Q9UGJ0 569 aa12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
CHMP4A-206ENST00000533011 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 PFASO15067 1338 aa12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 ZAP70P43403 619 aa12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
CHMP4A-206ENST00000533011 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 GPR75-ASB3A0A0A6YYF3 556 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 BTDP43251 543 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 TCP10Q12799 353 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 NFIAQ12857 509 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 DCTPP1Q9H773 170 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
CHMP4A-206ENST00000533011 PRUNE2Q8WUY3 3088 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 ENTPD3O75355 529 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 GADL1Q6ZQY3 521 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 ANKRD13CQ8N6S4 541 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 MYLIPQ8WY64 445 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 PCDHB15Q9Y5E8 787 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 LAMA2P24043 3122 aaKnown RBP12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 MAST2Q6P0Q8 1798 aa12.38□□□□□ -0.43
CHMP4A-206ENST00000533011 PTPRAP18433 802 aa12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 RGS3P49796 1198 aa12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 AGTPBP1Q9UPW5 1226 aa12.37□□□□□ -0.43
CHMP4A-206ENST00000533011 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 IDH1O75874 414 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 BAG3O95817 575 aa12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 RHBDL3P58872 404 aa12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 AAMPQ13685 434 aa12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-206ENST00000533011 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 NCOR1O75376 2440 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 PLCG2P16885 1265 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 ATP5JP18859 108 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 PPP4CP60510 307 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 PICALMQ13492 652 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 SOCS4Q8WXH5 440 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 RAPGEFL1Q9UHV5 662 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
CHMP4A-206ENST00000533011 DOCK2Q92608 1830 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 CYP7A1P22680 504 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 SHHQ15465 462 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 ADGRA1Q86SQ6 560 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 ZSCAN29Q8IWY8 852 aaPredicted RBP12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 TRIB2Q92519 343 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 DNAJC2Q99543 621 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
CHMP4A-206ENST00000533011 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.43
CHMP4A-206ENST00000533011 GOLIM4O00461 696 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 TRIM32Q13049 653 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 LHX8Q68G74 356 aa12.33□□□□□ -0.44
CHMP4A-206ENST00000533011 SH3BP5LQ7L8J4 393 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms