RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 GABRQQ9UN88 632 aa27.94■■■□□ 2.06
LTBP3-220ENST00000532661 SLFNL1Q499Z3 407 aa27.93■■■□□ 2.06
LTBP3-220ENST00000532661 RAET1EQ8TD07 263 aa27.93■■■□□ 2.06
LTBP3-220ENST00000532661 MKI67P46013 3256 aaKnown RBP27.93■■■□□ 2.06
LTBP3-220ENST00000532661 PDE4DIPQ5VU43 2346 aa27.92■■■□□ 2.06
LTBP3-220ENST00000532661 TCRBV5S4A2TA0A5A2 114 aa27.92■■■□□ 2.06
LTBP3-220ENST00000532661 ATP5JP18859 108 aa27.92■■■□□ 2.06
LTBP3-220ENST00000532661 BACE1P56817 501 aa27.92■■■□□ 2.06
LTBP3-220ENST00000532661 PNMA3Q9UL41 463 aa27.92■■■□□ 2.06
LTBP3-220ENST00000532661 KIAA0100Q14667 2235 aaKnown RBP27.92■■■□□ 2.06
LTBP3-220ENST00000532661 PLCD1P51178 756 aa27.91■■■□□ 2.06
LTBP3-220ENST00000532661 MTFR1Q15390 333 aa27.91■■■□□ 2.06
LTBP3-220ENST00000532661 LRRCC1Q9C099 1032 aa27.91■■■□□ 2.06
LTBP3-220ENST00000532661 ASCC2Q9H1I8 757 aaPredicted RBP27.91■■■□□ 2.06
LTBP3-220ENST00000532661 PAG1Q9NWQ8 432 aa27.91■■■□□ 2.06
LTBP3-220ENST00000532661 GH2P01242 217 aa27.9■■■□□ 2.06
LTBP3-220ENST00000532661 GRK4P32298 578 aa27.9■■■□□ 2.06
LTBP3-220ENST00000532661 TATDN1Q6P1N9 297 aa27.9■■■□□ 2.06
LTBP3-220ENST00000532661 GINM1Q9NU53 330 aa27.9■■■□□ 2.06
LTBP3-220ENST00000532661 SERPINB13Q9UIV8 391 aa27.9■■■□□ 2.06
LTBP3-220ENST00000532661 LOC285556D6RIA3 1793 aa27.89■■■□□ 2.06
LTBP3-220ENST00000532661 EVX2Q03828 476 aa27.89■■■□□ 2.06
LTBP3-220ENST00000532661 PABPC4Q13310 644 aaKnown RBP eCLIP27.89■■■□□ 2.06
LTBP3-220ENST00000532661 TTC6Q86TZ1 520 aa27.89■■■□□ 2.06
LTBP3-220ENST00000532661 LCORLQ8N3X6 602 aa27.89■■■□□ 2.06
LTBP3-220ENST00000532661 EHD4Q9H223 541 aa27.89■■■□□ 2.06
LTBP3-220ENST00000532661 USP17L10C9JJH3 530 aa27.88■■■□□ 2.05
LTBP3-220ENST00000532661 TNPO2O14787 897 aaKnown RBP27.88■■■□□ 2.05
LTBP3-220ENST00000532661 CHGBP05060 677 aa27.88■■■□□ 2.05
LTBP3-220ENST00000532661 FAM110CQ1W6H9 321 aa27.88■■■□□ 2.05
LTBP3-220ENST00000532661 HAUS7Q99871 368 aa27.88■■■□□ 2.05
LTBP3-220ENST00000532661 CRNKL1Q9BZJ0 848 aaKnown RBP27.88■■■□□ 2.05
LTBP3-220ENST00000532661 TMOD4Q9NZQ9 345 aa27.88■■■□□ 2.05
LTBP3-220ENST00000532661 RBBP6Q7Z6E9 1792 aaKnown RBP27.88■■■□□ 2.05
LTBP3-220ENST00000532661 MYH1P12882 1939 aa27.87■■■□□ 2.05
LTBP3-220ENST00000532661 PRPF38BQ5VTL8 546 aaKnown RBP27.87■■■□□ 2.05
LTBP3-220ENST00000532661 SDR42E1Q8WUS8 393 aa27.87■■■□□ 2.05
LTBP3-220ENST00000532661 ARMT1Q9H993 441 aa27.87■■■□□ 2.05
LTBP3-220ENST00000532661 C19orf81C9J6K1 198 aa27.86■■■□□ 2.05
LTBP3-220ENST00000532661 POLR3DP05423 398 aaPredicted RBP27.86■■■□□ 2.05
LTBP3-220ENST00000532661 SHMT1P34896 483 aa27.86■■■□□ 2.05
LTBP3-220ENST00000532661 ADD2P35612 726 aa27.86■■■□□ 2.05
LTBP3-220ENST00000532661 GCLCP48506 637 aaPredicted RBP27.86■■■□□ 2.05
LTBP3-220ENST00000532661 FLT3LGP49771 235 aa27.86■■■□□ 2.05
LTBP3-220ENST00000532661 PEX10O60683 326 aa27.85■■■□□ 2.05
LTBP3-220ENST00000532661 CERKLQ49MI3 558 aaPredicted RBP27.85■■■□□ 2.05
LTBP3-220ENST00000532661 P2RX7Q99572 595 aaKnown RBP27.85■■■□□ 2.05
LTBP3-220ENST00000532661 DCTPP1Q9H773 170 aa27.85■■■□□ 2.05
LTBP3-220ENST00000532661 EMILIN3Q9NT22 766 aa27.85■■■□□ 2.05
LTBP3-220ENST00000532661 MCM9Q9NXL9 1143 aa27.85■■■□□ 2.05
LTBP3-220ENST00000532661 BIN2Q9UBW5 565 aaPredicted RBP27.85■■■□□ 2.05
LTBP3-220ENST00000532661 PRKAB2O43741 272 aa27.84■■■□□ 2.05
LTBP3-220ENST00000532661 HOXA7P31268 230 aaPredicted RBP27.84■■■□□ 2.05
LTBP3-220ENST00000532661 IRX3P78415 501 aaPredicted RBP27.84■■■□□ 2.05
LTBP3-220ENST00000532661 DCP1AQ9NPI6 582 aaPredicted RBP27.84■■■□□ 2.05
LTBP3-220ENST00000532661 MGAMO43451 1857 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 MBD4O95243 580 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 CYP2D6P10635 497 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 ELNP15502 786 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 GABPAQ06546 454 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 RAB3GAP1Q15042 981 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 ABCB5Q2M3G0 1257 aa27.83■■■□□ 2.05
LTBP3-220ENST00000532661 ADCY3O60266 1144 aa27.82■■■□□ 2.04
LTBP3-220ENST00000532661 CCL5P13501 91 aa27.82■■■□□ 2.04
LTBP3-220ENST00000532661 ZYXQ15942 572 aaKnown RBP27.82■■■□□ 2.04
LTBP3-220ENST00000532661 USP17L2Q6R6M4 530 aa27.82■■■□□ 2.04
LTBP3-220ENST00000532661 SLAIN1Q8ND83 568 aa27.82■■■□□ 2.04
LTBP3-220ENST00000532661 COA7Q96BR5 231 aa27.82■■■□□ 2.04
LTBP3-220ENST00000532661 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.82■■■□□ 2.042e-6■■■■■ 28.9
LTBP3-220ENST00000532661 DDX60LQ5H9U9 1706 aaKnown RBP27.81■■■□□ 2.04
LTBP3-220ENST00000532661 GUCY1A2P33402 732 aa27.81■■■□□ 2.04
LTBP3-220ENST00000532661 HERVK_113P62684 666 aa27.81■■■□□ 2.04
LTBP3-220ENST00000532661 ACER1Q8TDN7 264 aa27.81■■■□□ 2.04
LTBP3-220ENST00000532661 TAOK2Q9UL54 1235 aa27.81■■■□□ 2.04
LTBP3-220ENST00000532661 PCDHB15Q9Y5E8 787 aa27.81■■■□□ 2.04
LTBP3-220ENST00000532661 IRF5Q13568 498 aa27.8■■■□□ 2.04
LTBP3-220ENST00000532661 SHISA4Q96DD7 197 aa27.8■■■□□ 2.04
LTBP3-220ENST00000532661 TXNRD2Q9NNW7 524 aa27.8■■■□□ 2.04
LTBP3-220ENST00000532661 ECHDC1Q9NTX5 307 aa27.8■■■□□ 2.04
LTBP3-220ENST00000532661 MORF4L1Q9UBU8 362 aa27.8■■■□□ 2.04
LTBP3-220ENST00000532661 UBXN2AP68543 259 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 TSHZ3Q63HK5 1081 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 SLC44A5Q8NCS7 719 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 FEZ1Q99689 392 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 RNF208Q9H0X6 261 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 CABP5Q9NP86 173 aa27.79■■■□□ 2.04
LTBP3-220ENST00000532661 SMIM22K7EJ46 135 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 UBE3CQ15386 1083 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 POTEEQ6S8J3 1075 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 PXYLP1Q8TE99 480 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 DYNLL2Q96FJ2 89 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 UNC93B1Q9H1C4 597 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 RBPJLQ9UBG7 517 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 NAV1Q8NEY1 1877 aa27.78■■■□□ 2.04
LTBP3-220ENST00000532661 INHAP05111 366 aa27.77■■■□□ 2.04
LTBP3-220ENST00000532661 RRP1P56182 461 aaKnown RBP27.77■■■□□ 2.04
LTBP3-220ENST00000532661 SEPT2Q15019 361 aa27.77■■■□□ 2.04
LTBP3-220ENST00000532661 C12orf42Q96LP6 360 aa27.77■■■□□ 2.04
LTBP3-220ENST00000532661 GJB1P08034 283 aa27.76■■■□□ 2.03
LTBP3-220ENST00000532661 KIAA1683Q9H0B3 1180 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms