RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 JAG1P78504 1218 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 UBE3CQ15386 1083 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 SH3D19Q5HYK7 790 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 TREML2Q5T2D2 321 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 TATDN1Q6P1N9 297 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 LCORLQ8N3X6 602 aa20.8■□□□□ 0.92
PHRF1-204ENST00000532550 C19orf81C9J6K1 198 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 USP17L10C9JJH3 530 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 MBD4O95243 580 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 OSBPP22059 807 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 CERKLQ49MI3 558 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-204ENST00000532550 SDR42E1Q8WUS8 393 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 TMOD4Q9NZQ9 345 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 ZBTB47Q9UFB7 747 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-204ENST00000532550 PTCH2Q9Y6C5 1203 aa20.79■□□□□ 0.92
PHRF1-204ENST00000532550 GH2P01242 217 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 MTMR2Q13614 643 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 SLC9C1Q4G0N8 1177 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 TRIM47Q96LD4 638 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
PHRF1-204ENST00000532550 ATP8A2Q9NTI2 1148 aa20.78■□□□□ 0.92
PHRF1-204ENST00000532550 FCGRTP55899 365 aa20.77■□□□□ 0.92
PHRF1-204ENST00000532550 ABCB5Q2M3G0 1257 aa20.77■□□□□ 0.92
PHRF1-204ENST00000532550 SHROOM1Q2M3G4 852 aaPredicted RBP20.77■□□□□ 0.92
PHRF1-204ENST00000532550 ARMC5Q96C12 935 aa20.77■□□□□ 0.92
PHRF1-204ENST00000532550 SRRDQ9UH36 339 aa20.77■□□□□ 0.92
PHRF1-204ENST00000532550 PRKAB2O43741 272 aa20.76■□□□□ 0.91
PHRF1-204ENST00000532550 CTGFP29279 349 aa20.76■□□□□ 0.91
PHRF1-204ENST00000532550 RAB3GAP1Q15042 981 aa20.76■□□□□ 0.91
PHRF1-204ENST00000532550 TSHZ3Q63HK5 1081 aa20.76■□□□□ 0.91
PHRF1-204ENST00000532550 DDRGK1Q96HY6 314 aa20.76■□□□□ 0.91
PHRF1-204ENST00000532550 ERC2O15083 957 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 CHGBP05060 677 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 SHMT1P34896 483 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 GCLCP48506 637 aaPredicted RBP20.75■□□□□ 0.91
PHRF1-204ENST00000532550 AMOTL1Q8IY63 956 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 ANKRD13CQ8N6S4 541 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 KBTBD3Q8NAB2 608 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 TMEM106CQ9BVX2 250 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 ASCC2Q9H1I8 757 aaPredicted RBP20.75■□□□□ 0.91
PHRF1-204ENST00000532550 SLC4A4Q9Y6R1 1079 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 KIAA0100Q14667 2235 aaKnown RBP20.75■□□□□ 0.91
PHRF1-204ENST00000532550 TTC41PQ6P2S7 1318 aa20.75■□□□□ 0.91
PHRF1-204ENST00000532550 MYH7P12883 1935 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 IRX3P78415 501 aaPredicted RBP20.74■□□□□ 0.91
PHRF1-204ENST00000532550 GABPAQ06546 454 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 AAMPQ13685 434 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 RAET1EQ8TD07 263 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
PHRF1-204ENST00000532550 ZSWIM8A7E2V4 1837 aa20.74■□□□□ 0.91
PHRF1-204ENST00000532550 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
PHRF1-204ENST00000532550 LRRFIP1Q32MZ4 808 aaKnown RBP20.73■□□□□ 0.91
PHRF1-204ENST00000532550 GCC1Q96CN9 775 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 ZNF333Q96JL9 665 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 SWAP70Q9UH65 585 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 TAOK2Q9UL54 1235 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 MYPNQ86TC9 1320 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 NAV1Q8NEY1 1877 aa20.73■□□□□ 0.91
PHRF1-204ENST00000532550 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
PHRF1-204ENST00000532550 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
PHRF1-204ENST00000532550 GLRX3O76003 335 aaKnown RBP20.72■□□□□ 0.91
PHRF1-204ENST00000532550 ZFYP08048 801 aaPredicted RBP20.72■□□□□ 0.91
PHRF1-204ENST00000532550 CYP2D6P10635 497 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
PHRF1-204ENST00000532550 FAM110CQ1W6H9 321 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 SH3TC2Q8TF17 1288 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 FEZ1Q99689 392 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 EMILIN3Q9NT22 766 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 LOC285556D6RIA3 1793 aa20.72■□□□□ 0.91
PHRF1-204ENST00000532550 USP17L12C9JPN9 530 aa20.71■□□□□ 0.91
PHRF1-204ENST00000532550 USP17L21D6R901 530 aa20.71■□□□□ 0.91
PHRF1-204ENST00000532550 TNPO2O14787 897 aaKnown RBP20.71■□□□□ 0.91
PHRF1-204ENST00000532550 USP14P54578 494 aa20.71■□□□□ 0.91
PHRF1-204ENST00000532550 EVX2Q03828 476 aa20.71■□□□□ 0.91
PHRF1-204ENST00000532550 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
PHRF1-204ENST00000532550 MGAMO43451 1857 aa20.71■□□□□ 0.91
PHRF1-204ENST00000532550 HTTP42858 3142 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 CENPFP49454 3210 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 MX1P20591 662 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 PRKCZQ05513 592 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 ZYXQ15942 572 aaKnown RBP20.7■□□□□ 0.9
PHRF1-204ENST00000532550 C12orf60Q5U649 245 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 OTUD7AQ8TE49 926 aaPredicted RBP20.7■□□□□ 0.9
PHRF1-204ENST00000532550 APPBP2Q92624 585 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 COA7Q96BR5 231 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 DYNLL2Q96FJ2 89 aa20.7■□□□□ 0.9
PHRF1-204ENST00000532550 STRBPQ96SI9 672 aaKnown RBP20.7■□□□□ 0.9
PHRF1-204ENST00000532550 BAZ2AQ9UIF9 1905 aaKnown RBP20.69■□□□□ 0.9
PHRF1-204ENST00000532550 POTEFA5A3E0 1075 aa20.69■□□□□ 0.9
PHRF1-204ENST00000532550 MYCP01106 439 aaPredicted RBP20.69■□□□□ 0.9
PHRF1-204ENST00000532550 GRK4P32298 578 aa20.69■□□□□ 0.9
PHRF1-204ENST00000532550 SEPT2Q15019 361 aa20.69■□□□□ 0.9
PHRF1-204ENST00000532550 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
PHRF1-204ENST00000532550 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
PHRF1-204ENST00000532550 BIN2Q9UBW5 565 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms