RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 SEC23AQ15436 765 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 LDHDQ86WU2 507 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 RAB11FIP4Q86YS3 637 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 KLF18A0A0U1RQI7 1052 aa25.8■■□□□ 1.72
PACSIN3-209ENST00000532457 NPM3O75607 178 aaKnown RBP25.8■■□□□ 1.72
PACSIN3-209ENST00000532457 RASA1P20936 1047 aa25.8■■□□□ 1.72
PACSIN3-209ENST00000532457 CCT2P78371 535 aaKnown RBP25.8■■□□□ 1.72
PACSIN3-209ENST00000532457 GTF3C6Q969F1 213 aa25.8■■□□□ 1.72
PACSIN3-209ENST00000532457 LIFRP42702 1097 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 SPDYE2Q495Y8 402 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 TTC6Q86TZ1 520 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 DCPSQ96C86 337 aaKnown RBP25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 MKNK2Q9HBH9 465 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 NCOA5Q9HCD5 579 aaKnown RBP25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 PGAP2Q9UHJ9 254 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 PITPNM2Q9BZ72 1349 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 TFAP4Q01664 338 aa25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 ZSCAN10Q96SZ4 725 aaPredicted RBP25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 CWC22Q9HCG8 908 aaKnown RBP25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 NAP1L2Q9ULW6 460 aaPredicted RBP25.79■■□□□ 1.72
PACSIN3-209ENST00000532457 TCP10L2B9ZVM9 353 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 KIF3CO14782 793 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 TNFAIP1Q13829 316 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 ANGEL2Q5VTE6 544 aaKnown RBP25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 SGMS1Q86VZ5 419 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 ENAHQ8N8S7 591 aaPredicted RBP25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 MTA3Q9BTC8 594 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 IL17RBQ9NRM6 502 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 GGA3Q9NZ52 723 aa25.78■■□□□ 1.72
PACSIN3-209ENST00000532457 TNKSO95271 1327 aa25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 PKP1Q13835 747 aa25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 APOBEC3FQ8IUX4 373 aaKnown RBP25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 VEZTQ9HBM0 779 aa25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 CHMP5Q9NZZ3 219 aa25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 UBAC1Q9BSL1 405 aa25.77■■□□□ 1.72
PACSIN3-209ENST00000532457 ENTPD3O75355 529 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 CTDNEP1O95476 244 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 WTAPQ15007 396 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 FKBP1CQ5VVH2 108 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 APOA5Q6Q788 366 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 ZNF444Q8N0Y2 327 aaPredicted RBP25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 MYL10Q9BUA6 226 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 CNTNAP1P78357 1384 aa25.76■■□□□ 1.71
PACSIN3-209ENST00000532457 TSPY2A6NKD2 308 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 POTEIP0CG38 1075 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 POTEJP0CG39 1038 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 RXRAP19793 462 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 TNNI2P48788 182 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 SULF1Q8IWU6 871 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 DNAJC18Q9H819 358 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 SERPINB13Q9UIV8 391 aa25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 SCAF8Q9UPN6 1271 aaKnown RBP25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 ASTN2O75129 1339 aaPredicted RBP25.75■■□□□ 1.71
PACSIN3-209ENST00000532457 RCSD1Q6JBY9 416 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 NFXL1Q6ZNB6 911 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 DHX36Q9H2U1 1008 aaKnown RBP25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 SIPA1L1O43166 1804 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 GOLGA8BA8MQT2 603 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 JAK2O60674 1132 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 TOMM70O94826 608 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 SHMT1P34896 483 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 SART3Q15020 963 aaKnown RBP25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 IQCA1Q86XH1 822 aa25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 ZSCAN29Q8IWY8 852 aaPredicted RBP25.74■■□□□ 1.71
PACSIN3-209ENST00000532457 FAM196BA6NMK8 535 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 GJB2P29033 226 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 CHADLQ6NUI6 762 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 CDC37L1Q7L3B6 337 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 FAM217BQ9NTX9 383 aaPredicted RBP25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 PI4KBQ9UBF8 816 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 CIZ1Q9ULV3 898 aaPredicted RBP25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 SMC3Q9UQE7 1217 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 ZDHHC9Q9Y397 364 aa25.73■■□□□ 1.71
PACSIN3-209ENST00000532457 ERICH2A1L162 156 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 KRT26Q7Z3Y9 468 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 CDAN1Q8IWY9 1227 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 EHD4Q9H223 541 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 ATRNL1Q5VV63 1379 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 CCDC69A6NI79 296 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 PPFIA3O75145 1194 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 HLA-DOAP06340 250 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 FAM83AQ86UY5 434 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 TMTC2Q8N394 836 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 NSUN7Q8NE18 718 aaKnown RBP25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 FAM151AQ8WW52 585 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 ZNF287Q9HBT7 754 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 SLC12A7Q9Y666 1083 aa25.72■■□□□ 1.71
PACSIN3-209ENST00000532457 TSPY3P0CV98 308 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 TSPY8P0CW00 308 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 CDC27P30260 824 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 ADD1P35611 737 aaKnown RBP25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 METTL16Q86W50 562 aaKnown RBP25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 CCDC144CPQ8IYA2 1237 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 NEDD1Q8NHV4 660 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 TCP11L1Q9NUJ3 509 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 PPP2R3BQ9Y5P8 575 aa25.71■■□□□ 1.71
PACSIN3-209ENST00000532457 ZBTB43O43298 467 aa25.7■■□□□ 1.71
PACSIN3-209ENST00000532457 MAP1SQ66K74 1059 aaPredicted RBP25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms