RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 COL2A1P02458 1487 aaPredicted RBP11.24□□□□□ -0.61
SRPRA-207ENST00000532268 LAMA4Q16363 1823 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 ORC4O43929 436 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 HSPA6P17066 643 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 PRKG1Q13976 671 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 SUPT20HL1Q3ZLR7 823 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 CHADLQ6NUI6 762 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 NFXL1Q6ZNB6 911 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 Q6ZUG5 572 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 CYB5R4Q7L1T6 521 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 LDHDQ86WU2 507 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 HSCBQ8IWL3 235 aa11.23□□□□□ -0.61
SRPRA-207ENST00000532268 MB21D2Q8IYB1 491 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRPRA-207ENST00000532268 GDF11O95390 407 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 RASA1P20936 1047 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 SHMT1P34896 483 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 ATP2B2Q01814 1243 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 GABPAQ06546 454 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 BECN1Q14457 450 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 ANKRD1Q15327 319 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 DDX60LQ5H9U9 1706 aaKnown RBP11.22□□□□□ -0.61
SRPRA-207ENST00000532268 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
SRPRA-207ENST00000532268 DLK2Q6UY11 383 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
SRPRA-207ENST00000532268 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
SRPRA-207ENST00000532268 CCDC69A6NI79 296 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 FGRP09769 529 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 AKR1B1P15121 316 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 AK2P54819 239 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 ANTXR2P58335 489 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.61
SRPRA-207ENST00000532268 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-207ENST00000532268 WTAPQ15007 396 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 ABCB5Q2M3G0 1257 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 BRF1Q92994 677 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 IL17RAQ96F46 866 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 CDCA5Q96FF9 252 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 TMEM87BQ96K49 555 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 TEPSINQ96N21 525 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 ZSCAN10Q96SZ4 725 aaPredicted RBP11.21□□□□□ -0.61
SRPRA-207ENST00000532268 ZNF341Q9BYN7 854 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 DNAJC18Q9H819 358 aa11.21□□□□□ -0.61
SRPRA-207ENST00000532268 TNKSO95271 1327 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 PPP1R12BO60237 982 aaPredicted RBP11.2□□□□□ -0.62
SRPRA-207ENST00000532268 NMT2O60551 498 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 NT5C2P49902 561 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 APLP1P51693 650 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 CCDC178Q5BJE1 867 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 IFIT1BQ5T764 474 aaKnown RBP11.2□□□□□ -0.62
SRPRA-207ENST00000532268 SYNE3Q6ZMZ3 975 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 NKX2-3Q8TAU0 364 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 STX8Q9UNK0 236 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
SRPRA-207ENST00000532268 SH2B2O14492 632 aaPredicted RBP11.19□□□□□ -0.62
SRPRA-207ENST00000532268 RAD21O60216 631 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 TBC1D12O60347 775 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 GH2P01242 217 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
SRPRA-207ENST00000532268 MCM2P49736 904 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
SRPRA-207ENST00000532268 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 NEDD1Q8NHV4 660 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 TTC14Q96N46 770 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 WRNIP1Q96S55 665 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
SRPRA-207ENST00000532268 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
SRPRA-207ENST00000532268 FZD1Q9UP38 647 aa11.19□□□□□ -0.62
SRPRA-207ENST00000532268 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 TRAF5O00463 557 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-207ENST00000532268 IREB2P48200 963 aaKnown RBP11.18□□□□□ -0.62
SRPRA-207ENST00000532268 STK3Q13188 491 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 TOB2Q14106 344 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-207ENST00000532268 SEPT2Q15019 361 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
SRPRA-207ENST00000532268 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 TATDN1Q6P1N9 297 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 TMEM179Q6ZVK1 233 aa11.18□□□□□ -0.62
SRPRA-207ENST00000532268 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms