RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 KCNJ14Q9UNX9 436 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 MYO3AQ8NEV4 1616 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 F13A1P00488 732 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 USP14P54578 494 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 KCTD1Q719H9 257 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 VPS54Q9P1Q0 977 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 KLRF2D3W0D1 207 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 M0R2C6 588 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 SEC24BO95487 1268 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.96
CTNND1-230ENST00000532245 PRDX5P30044 214 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.96
CTNND1-230ENST00000532245 HSP90AA4PQ58FG1 418 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 CCDC17Q96LX7 622 aa9.02□□□□□ -0.96
CTNND1-230ENST00000532245 NUP88Q99567 741 aaPredicted RBP9.02□□□□□ -0.96
CTNND1-230ENST00000532245 DHX36Q9H2U1 1008 aaKnown RBP9.02□□□□□ -0.96
CTNND1-230ENST00000532245 SMCO2A6NFE2 343 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 VPS36Q86VN1 386 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 DIS3L2Q8IYB7 885 aaKnown RBP9.02□□□□□ -0.97
CTNND1-230ENST00000532245 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 MRPS27Q92552 414 aaKnown RBP9.02□□□□□ -0.97
CTNND1-230ENST00000532245 PIH1D3Q9NQM4 214 aaKnown RBP9.02□□□□□ -0.97
CTNND1-230ENST00000532245 MYO3BQ8WXR4 1341 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 CD163L1Q9NR16 1453 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 USP37Q86T82 979 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 NLRX1Q86UT6 975 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 ADCY9O60503 1353 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 PDE4DQ08499 809 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 SKIDA1Q1XH10 827 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 MRPL11Q9Y3B7 192 aaKnown RBP9.02□□□□□ -0.97
CTNND1-230ENST00000532245 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 ADD2P35612 726 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 GNPTABQ3T906 1256 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 REXO1Q8N1G1 1221 aaKnown RBP9.02□□□□□ -0.97
CTNND1-230ENST00000532245 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 WRNIP1Q96S55 665 aa9.02□□□□□ -0.97
CTNND1-230ENST00000532245 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 M0QZ92 97 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 POLR2MP0CAP2 368 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 TNNT1P13805 278 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 NRKQ7Z2Y5 1582 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 PSTPIP2Q9H939 334 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 CDHR2Q9BYE9 1310 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 CCP110O43303 1012 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 SPA17Q15506 151 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 BRAPQ7Z569 592 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 FAM114A1Q8IWE2 563 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 PUS7LQ9H0K6 701 aaKnown RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 SH3RF3Q8TEJ3 882 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 RUFY1Q96T51 708 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 TRIM6Q9C030 488 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 FAM196BA6NMK8 535 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 TTLL1O95922 423 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 GSPT1P15170 499 aaKnown RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 SLC16A2P36021 539 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 MCAMP43121 646 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 PPM1FP49593 454 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 TAF12Q16514 161 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 KIF4BQ2VIQ3 1234 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 KRT25Q7Z3Z0 450 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 TRMT2AQ8IZ69 625 aaKnown RBP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.97
CTNND1-230ENST00000532245 IMPG2Q9BZV3 1241 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
CTNND1-230ENST00000532245 ARHGEF35A5YM69 484 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 UBE2HP62256 183 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 HS2ST1Q7LGA3 356 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 ZNF341Q9BYN7 854 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 KANSL2Q9H9L4 492 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 ZNRF3Q9ULT6 936 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 TRPC6Q9Y210 931 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 CPDO75976 1380 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 ZMYM1Q5SVZ6 1142 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 METTL13Q8N6R0 699 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 SYNCQ9H7C4 482 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 ZHX2Q9Y6X8 837 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 DNA2P51530 1060 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 STX1AQ16623 288 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 SPOUT1Q5T280 376 aaKnown RBP9□□□□□ -0.97
CTNND1-230ENST00000532245 HAUS3Q68CZ6 603 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 MCF2L2Q86YR7 1114 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 ZBTB12Q9Y330 459 aaPredicted RBP9□□□□□ -0.97
CTNND1-230ENST00000532245 UBXN2AP68543 259 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 PPP2R5BQ15173 497 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 UTP14CQ5TAP6 766 aaKnown RBP9□□□□□ -0.97
CTNND1-230ENST00000532245 IFT74Q96LB3 600 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 CNOT7Q9UIV1 285 aaKnown RBP9□□□□□ -0.97
CTNND1-230ENST00000532245 MACROD2A1Z1Q3 448 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 POLA2Q14181 598 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 RILPL1Q5EBL4 403 aa9□□□□□ -0.97
CTNND1-230ENST00000532245 TTC38Q5R3I4 469 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms