RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 PABPC4Q13310 644 aaKnown RBP eCLIP25.77■■□□□ 1.72
FDFT1-220ENST00000531733 CCDC158Q5M9N0 1113 aa25.77■■□□□ 1.72
FDFT1-220ENST00000531733 ZKSCAN2Q63HK3 967 aa25.77■■□□□ 1.72
FDFT1-220ENST00000531733 MORF4L1Q9UBU8 362 aa25.77■■□□□ 1.72
FDFT1-220ENST00000531733 DBNLQ9UJU6 430 aaKnown RBP25.77■■□□□ 1.72
FDFT1-220ENST00000531733 LAMA3Q16787 3333 aa25.76■■□□□ 1.72
FDFT1-220ENST00000531733 EVI5O60447 810 aa25.76■■□□□ 1.71
FDFT1-220ENST00000531733 SURF6O75683 361 aaKnown RBP25.76■■□□□ 1.71
FDFT1-220ENST00000531733 HMGCRP04035 888 aa25.76■■□□□ 1.71
FDFT1-220ENST00000531733 OS9Q13438 667 aaPredicted RBP25.76■■□□□ 1.71
FDFT1-220ENST00000531733 PLCG2P16885 1265 aa25.75■■□□□ 1.71
FDFT1-220ENST00000531733 POTEEQ6S8J3 1075 aa25.75■■□□□ 1.71
FDFT1-220ENST00000531733 TRIB2Q92519 343 aa25.75■■□□□ 1.71
FDFT1-220ENST00000531733 NDUFB9Q9Y6M9 179 aa25.75■■□□□ 1.71
FDFT1-220ENST00000531733 ASNSP08243 561 aa25.74■■□□□ 1.71
FDFT1-220ENST00000531733 RLBP1P12271 317 aa25.74■■□□□ 1.71
FDFT1-220ENST00000531733 MNX1P50219 401 aaPredicted RBP25.74■■□□□ 1.71
FDFT1-220ENST00000531733 IRX3P78415 501 aaPredicted RBP25.74■■□□□ 1.71
FDFT1-220ENST00000531733 CCDC8Q9H0W5 538 aaPredicted RBP25.74■■□□□ 1.71
FDFT1-220ENST00000531733 ZBTB21Q9ULJ3 1066 aa25.74■■□□□ 1.71
FDFT1-220ENST00000531733 CYP2B6P20813 491 aa25.73■■□□□ 1.71
FDFT1-220ENST00000531733 HOXA7P31268 230 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-220ENST00000531733 FOXP4Q8IVH2 680 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-220ENST00000531733 CRACR2BQ8N4Y2 399 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-220ENST00000531733 EAF2Q96CJ1 260 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-220ENST00000531733 ZNF512BQ96KM6 892 aaPredicted RBP25.73■■□□□ 1.71
FDFT1-220ENST00000531733 TMOD4Q9NZQ9 345 aa25.73■■□□□ 1.71
FDFT1-220ENST00000531733 STAP2Q9UGK3 403 aa25.73■■□□□ 1.71
FDFT1-220ENST00000531733 SOX1O00570 391 aaPredicted RBP25.72■■□□□ 1.71
FDFT1-220ENST00000531733 HERVK_113P62684 666 aa25.72■■□□□ 1.71
FDFT1-220ENST00000531733 Q3C1V9 767 aa25.72■■□□□ 1.71
FDFT1-220ENST00000531733 EMILIN3Q9NT22 766 aa25.72■■□□□ 1.71
FDFT1-220ENST00000531733 RBPJLQ9UBG7 517 aa25.72■■□□□ 1.71
FDFT1-220ENST00000531733 NOP58Q9Y2X3 529 aaKnown RBP25.72■■□□□ 1.71
FDFT1-220ENST00000531733 RPTORQ8N122 1335 aa25.71■■□□□ 1.71
FDFT1-220ENST00000531733 USP17L10C9JJH3 530 aa25.71■■□□□ 1.71
FDFT1-220ENST00000531733 CYP7A1P22680 504 aa25.71■■□□□ 1.71
FDFT1-220ENST00000531733 NECAB2Q7Z6G3 386 aa25.71■■□□□ 1.71
FDFT1-220ENST00000531733 MIGA1Q8NAN2 632 aa25.71■■□□□ 1.71
FDFT1-220ENST00000531733 DDX60LQ5H9U9 1706 aaKnown RBP25.71■■□□□ 1.71
FDFT1-220ENST00000531733 GPRC5AQ8NFJ5 357 aa25.7■■□□□ 1.7
FDFT1-220ENST00000531733 ANTXR1Q9H6X2 564 aa25.7■■□□□ 1.7
FDFT1-220ENST00000531733 HMX1Q9NP08 348 aaPredicted RBP25.7■■□□□ 1.7
FDFT1-220ENST00000531733 MYH1P12882 1939 aa25.69■■□□□ 1.7
FDFT1-220ENST00000531733 C19orf81C9J6K1 198 aa25.69■■□□□ 1.7
FDFT1-220ENST00000531733 C7orf61Q8IZ16 206 aa25.69■■□□□ 1.7
FDFT1-220ENST00000531733 TRIM34Q9BYJ4 488 aa25.69■■□□□ 1.7
FDFT1-220ENST00000531733 PORCNQ9H237 461 aa25.69■■□□□ 1.7
FDFT1-220ENST00000531733 IDH1O75874 414 aaKnown RBP25.68■■□□□ 1.7
FDFT1-220ENST00000531733 GH2P01242 217 aa25.68■■□□□ 1.7
FDFT1-220ENST00000531733 CAPN2P17655 700 aa25.68■■□□□ 1.7
FDFT1-220ENST00000531733 MAP3K21Q5TCX8 1036 aa25.68■■□□□ 1.7
FDFT1-220ENST00000531733 ITPRIPQ8IWB1 547 aa25.68■■□□□ 1.7
FDFT1-220ENST00000531733 PRKAR2AP13861 404 aaKnown RBP25.67■■□□□ 1.7
FDFT1-220ENST00000531733 ANKLE1Q8NAG6 615 aa25.67■■□□□ 1.7
FDFT1-220ENST00000531733 USP6NLQ92738 828 aa25.67■■□□□ 1.7
FDFT1-220ENST00000531733 LRCH3Q96II8 777 aa25.67■■□□□ 1.7
FDFT1-220ENST00000531733 PAGR1Q9BTK6 254 aa25.67■■□□□ 1.7
FDFT1-220ENST00000531733 ZMYND8Q9ULU4 1186 aaPredicted RBP25.67■■□□□ 1.7
FDFT1-220ENST00000531733 COL6A3P12111 3177 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 HLA-DOAP06340 250 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 ERVK-9P63128 1117 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 ERVK-24P63145 666 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 ZYXQ15942 572 aaKnown RBP25.66■■□□□ 1.7
FDFT1-220ENST00000531733 CCL14Q16627 93 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 MAGEB6Q8N7X4 407 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 NUDT12Q9BQG2 462 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 GINM1Q9NU53 330 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 OGDHLQ9ULD0 1010 aa25.66■■□□□ 1.7
FDFT1-220ENST00000531733 CNMDO75829 334 aa25.65■■□□□ 1.7
FDFT1-220ENST00000531733 TATDN1Q6P1N9 297 aa25.65■■□□□ 1.7
FDFT1-220ENST00000531733 FTSJ3Q8IY81 847 aaKnown RBP25.65■■□□□ 1.7
FDFT1-220ENST00000531733 CACNB2Q08289 660 aaPredicted RBP25.64■■□□□ 1.7
FDFT1-220ENST00000531733 MORN1Q5T089 497 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 CEP85Q6P2H3 762 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 USP17L2Q6R6M4 530 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 GPR142Q7Z601 462 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 GDF15Q99988 308 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 NBPF3Q9H094 633 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 C11orf49Q9H6J7 331 aa25.64■■□□□ 1.7
FDFT1-220ENST00000531733 PFASO15067 1338 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 A0A1W2PPC1 479 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 XRCC5P13010 732 aaKnown RBP25.63■■□□□ 1.69
FDFT1-220ENST00000531733 SYN1P17600 705 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 MAPK4P31152 587 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 USP5P45974 858 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 EVX2Q03828 476 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 ACER1Q8TDN7 264 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 SOCS4Q8WXH5 440 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 EXOC6BQ9Y2D4 811 aa25.63■■□□□ 1.69
FDFT1-220ENST00000531733 IGSF3O75054 1194 aa25.62■■□□□ 1.69
FDFT1-220ENST00000531733 CCND3P30281 292 aaPredicted RBP25.62■■□□□ 1.69
FDFT1-220ENST00000531733 DNAH12Q6ZR08 3092 aa25.62■■□□□ 1.69
FDFT1-220ENST00000531733 ZKSCAN1P17029 563 aaPredicted RBP25.61■■□□□ 1.69
FDFT1-220ENST00000531733 PLCD1P51178 756 aa25.61■■□□□ 1.69
FDFT1-220ENST00000531733 PLEKHH3Q7Z736 793 aa25.61■■□□□ 1.69
FDFT1-220ENST00000531733 C12orf42Q96LP6 360 aa25.61■■□□□ 1.69
FDFT1-220ENST00000531733 SERPINB13Q9UIV8 391 aa25.61■■□□□ 1.69
FDFT1-220ENST00000531733 SHMT1P34896 483 aa25.6■■□□□ 1.69
FDFT1-220ENST00000531733 HNRNPUQ00839 825 aaKnown RBP eCLIP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms