RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 GPAT2Q6NUI2 795 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
FOXR1-202ENST00000531539 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 AS3MTQ9HBK9 375 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 CABP5Q9NP86 173 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
FOXR1-202ENST00000531539 GSG1L2A8MUP6 293 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 GPAA1O43292 621 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 SHMT1P34896 483 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 ABCB5Q2M3G0 1257 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 C12orf60Q5U649 245 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 CTR9Q6PD62 1173 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
FOXR1-202ENST00000531539 GINM1Q9NU53 330 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 MYH1P12882 1939 aa17.36■□□□□ 0.37
FOXR1-202ENST00000531539 PATL2C9JE40 543 aaKnown RBP17.35■□□□□ 0.37
FOXR1-202ENST00000531539 SMIM22K7EJ46 135 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 GNAT2P19087 354 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 HMGCS2P54868 508 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 SP3Q02447 781 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 GABPAQ06546 454 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
FOXR1-202ENST00000531539 WDR18Q9BV38 432 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
FOXR1-202ENST00000531539 MINDY4BA8MYZ0 360 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 MPHOSPH10O00566 681 aaKnown RBP17.34■□□□□ 0.37
FOXR1-202ENST00000531539 TLR2O60603 784 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 CAPN15O75808 1086 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 OSBPL3Q9H4L5 887 aa17.34■□□□□ 0.37
FOXR1-202ENST00000531539 USP17L10C9JJH3 530 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 CYP2C8P10632 490 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 CDK8P49336 464 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 IFFO2Q5TF58 517 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 CD99L2Q8TCZ2 262 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 SWAP70Q9UH65 585 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 CPA4Q9UI42 421 aa17.33■□□□□ 0.36
FOXR1-202ENST00000531539 C19orf81C9J6K1 198 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 PDE4AP27815 886 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 TDO2P48775 406 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 BACE1P56817 501 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 MTMR2Q13614 643 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 PROCA1Q8NCQ7 364 aaPredicted RBP17.32■□□□□ 0.36
FOXR1-202ENST00000531539 ERO1AQ96HE7 468 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 TMOD4Q9NZQ9 345 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
FOXR1-202ENST00000531539 MYH7P12883 1935 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
FOXR1-202ENST00000531539 SEPT2Q15019 361 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 FAM227BQ96M60 508 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 PARK7Q99497 189 aaKnown RBP17.31■□□□□ 0.36
FOXR1-202ENST00000531539 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 ARPP21Q9UBL0 812 aaPredicted RBP17.31■□□□□ 0.36
FOXR1-202ENST00000531539 AGTPBP1Q9UPW5 1226 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 DOCK1Q14185 1865 aa17.31■□□□□ 0.36
FOXR1-202ENST00000531539 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
FOXR1-202ENST00000531539 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 C17orf99Q6UX52 265 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 C16orf86Q6ZW13 317 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
FOXR1-202ENST00000531539 SLC45A1Q9Y2W3 748 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 TRIM17Q9Y577 477 aa17.3■□□□□ 0.36
FOXR1-202ENST00000531539 AKR1B1P15121 316 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 SDSP20132 328 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 OSBPP22059 807 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
FOXR1-202ENST00000531539 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
FOXR1-202ENST00000531539 KIF22Q14807 665 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 USP17L2Q6R6M4 530 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 FEZ1Q99689 392 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 EFCC1Q9HA90 598 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
FOXR1-202ENST00000531539 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
FOXR1-202ENST00000531539 ARHGEF6Q15052 776 aa17.28■□□□□ 0.36
FOXR1-202ENST00000531539 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
FOXR1-202ENST00000531539 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
FOXR1-202ENST00000531539 NAPBQ9H115 298 aa17.28■□□□□ 0.36
FOXR1-202ENST00000531539 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
FOXR1-202ENST00000531539 LAMB1P07942 1786 aa17.28■□□□□ 0.36
FOXR1-202ENST00000531539 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms