RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 ARMC5Q96C12 935 aa15.15■□□□□ 0.02
C11orf54-210ENST00000531516 LAMB1P07942 1786 aa15.15■□□□□ 0.02
C11orf54-210ENST00000531516 MBD4O95243 580 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 GH2P01242 217 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
C11orf54-210ENST00000531516 USP14P54578 494 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 RAB3GAP1Q15042 981 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 ABCB5Q2M3G0 1257 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 SH3D19Q5HYK7 790 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 USP17L2Q6R6M4 530 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
C11orf54-210ENST00000531516 GTF3C2Q8WUA4 911 aaPredicted RBP15.14■□□□□ 0.01
C11orf54-210ENST00000531516 COA7Q96BR5 231 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
C11orf54-210ENST00000531516 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 SWAP70Q9UH65 585 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 PTCH2Q9Y6C5 1203 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 MYPNQ86TC9 1320 aa15.14■□□□□ 0.01
C11orf54-210ENST00000531516 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
C11orf54-210ENST00000531516 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
C11orf54-210ENST00000531516 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
C11orf54-210ENST00000531516 BCRP11274 1271 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
C11orf54-210ENST00000531516 ARHGAP39Q9C0H5 1083 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 ARMT1Q9H993 441 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
C11orf54-210ENST00000531516 TTC41PQ6P2S7 1318 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 ADGRA2Q96PE1 1338 aa15.13■□□□□ 0.01
C11orf54-210ENST00000531516 TCRBV5S4A2TA0A5A2 114 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 UBXN2AP68543 259 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 TREML2Q5T2D2 321 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 LCORLQ8N3X6 602 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 DNAJC18Q9H819 358 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 DCP1AQ9NPI6 582 aaPredicted RBP15.12■□□□□ 0.01
C11orf54-210ENST00000531516 SLC4A4Q9Y6R1 1079 aa15.12■□□□□ 0.01
C11orf54-210ENST00000531516 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
C11orf54-210ENST00000531516 RRP1BQ14684 758 aaKnown RBP15.11■□□□□ 0.01
C11orf54-210ENST00000531516 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
C11orf54-210ENST00000531516 SDR42E1Q8WUS8 393 aa15.11■□□□□ 0.01
C11orf54-210ENST00000531516 CRBNQ96SW2 442 aa15.11■□□□□ 0.01
C11orf54-210ENST00000531516 ASCC2Q9H1I8 757 aaPredicted RBP15.11■□□□□ 0.01
C11orf54-210ENST00000531516 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
C11orf54-210ENST00000531516 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
C11orf54-210ENST00000531516 PCDHB15Q9Y5E8 787 aa15.11■□□□□ 0.01
C11orf54-210ENST00000531516 DOCK1Q14185 1865 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 GNAT2P19087 354 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
C11orf54-210ENST00000531516 GRK4P32298 578 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 PLCD1P51178 756 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 SLAIN1Q8ND83 568 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 ZNF333Q96JL9 665 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
C11orf54-210ENST00000531516 ANKRD45Q5TZF3 282 aa15.09■□□□□ 0.01
C11orf54-210ENST00000531516 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
C11orf54-210ENST00000531516 NKX2-3Q8TAU0 364 aa15.09■□□□□ 0.01
C11orf54-210ENST00000531516 APPBP2Q92624 585 aa15.09■□□□□ 0.01
C11orf54-210ENST00000531516 RWDD1Q9H446 243 aaPredicted RBP15.09■□□□□ 0.01
C11orf54-210ENST00000531516 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
C11orf54-210ENST00000531516 USP17L15C9J2P7 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L13C9JLJ4 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L11C9JVI0 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L18D6R9N7 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L22D6RA61 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L17D6RBQ6 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L19D6RCP7 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L20D6RJB6 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
C11orf54-210ENST00000531516 MYCP01106 439 aaPredicted RBP15.08■□□□□ 0
C11orf54-210ENST00000531516 APPP05067 770 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 MX1P20591 662 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 SHMT1P34896 483 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 CCNA1P78396 465 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 PRKCZQ05513 592 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L24Q0WX57 530 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 GPRC5AQ8NFJ5 357 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 SH3TC2Q8TF17 1288 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 FSD1Q9BTV5 496 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 NACAP1Q9BZK3 213 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 KIAA1683Q9H0B3 1180 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 ARHGEF10LQ9HCE6 1279 aa15.08■□□□□ 0
C11orf54-210ENST00000531516 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
C11orf54-210ENST00000531516 USP17L12C9JPN9 530 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 USP17L21D6R901 530 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 HERVK_113P62684 666 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 GABPAQ06546 454 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
C11orf54-210ENST00000531516 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
C11orf54-210ENST00000531516 GIMAP6Q6P9H5 292 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 C12orf42Q96LP6 360 aa15.07■□□□□ 0
C11orf54-210ENST00000531516 PRKAB2O43741 272 aa15.06■□□□□ 0
C11orf54-210ENST00000531516 ADCY3O60266 1144 aa15.06■□□□□ 0
C11orf54-210ENST00000531516 CAPN2P17655 700 aa15.06■□□□□ 0
C11orf54-210ENST00000531516 MAPK4P31152 587 aa15.06■□□□□ 0
C11orf54-210ENST00000531516 FLT3LGP49771 235 aa15.06■□□□□ 0
C11orf54-210ENST00000531516 JAG1P78504 1218 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms