RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 HDLBPQ00341 1268 aaKnown RBP8.73□□□□□ -1.01
PACS1-211ENST00000531298 TROAPQ12815 778 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 DHX8Q14562 1220 aaKnown RBP8.73□□□□□ -1.01
PACS1-211ENST00000531298 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 KRT40Q6A162 431 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 CHST3Q7LGC8 479 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 NBPF11Q86T75 865 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 MRPS27Q92552 414 aaKnown RBP8.73□□□□□ -1.01
PACS1-211ENST00000531298 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 NOL7Q9UMY1 257 aaKnown RBP8.73□□□□□ -1.01
PACS1-211ENST00000531298 CEP131Q9UPN4 1083 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 TNKSO95271 1327 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 PLIN4Q96Q06 1357 aa8.73□□□□□ -1.01
PACS1-211ENST00000531298 ESPNB1AK53 854 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 USP17L21D6R901 530 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 KINO60870 393 aaKnown RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 SRGNP10124 158 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 LIG1P18858 919 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 PRDX5P30044 214 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 KCNQ4P56696 695 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 DDR1Q08345 913 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 FUT2Q10981 343 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 SEMA3FQ13275 785 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 STK38Q15208 465 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 CT47A1Q5JQC4 288 aaPredicted RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 IFIT1BQ5T764 474 aaKnown RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 STYK1Q6J9G0 422 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 TEX2Q8IWB9 1127 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 ENAHQ8N8S7 591 aaPredicted RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 MIGA1Q8NAN2 632 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 TBC1D16Q8TBP0 767 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 BICD2Q8TD16 824 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 CHAMP1Q96JM3 812 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 EYA3Q99504 573 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 BPIFA3Q9BQP9 254 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
PACS1-211ENST00000531298 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 GPHNQ9NQX3 736 aaPredicted RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
PACS1-211ENST00000531298 TACC3Q9Y6A5 838 aa8.72□□□□□ -1.01
PACS1-211ENST00000531298 RANBP6O60518 1105 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 CUTAO60888 179 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 TRIM37O94972 964 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 GPSM2P81274 684 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 AKAP17AQ02040 695 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 PTPAQ15257 358 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 SARM1Q6SZW1 724 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 SASS6Q6UVJ0 657 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 HHIPL2Q6UWX4 724 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 PODNQ7Z5L7 613 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 NOSTRINQ8IVI9 506 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 CCAR1Q8IX12 1150 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 MASTLQ96GX5 879 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 CCDC34Q96HJ3 373 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 RTFDC1Q9BY42 306 aaPredicted RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 NAT10Q9H0A0 1025 aaKnown RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 TMX4Q9H1E5 349 aaPredicted RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 BRMS1Q9HCU9 246 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 ANO10Q9NW15 660 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 NAP1L2Q9ULW6 460 aaPredicted RBP8.71□□□□□ -1.02
PACS1-211ENST00000531298 PCDHA7Q9UN72 937 aa8.71□□□□□ -1.02
PACS1-211ENST00000531298 MINDY4BA8MYZ0 360 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 ZNF500O60304 480 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 NR1I2O75469 434 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 UFL1O94874 794 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 KLRK1P26718 216 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 CALML3P27482 149 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 CDC25BP30305 580 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 ME1P48163 572 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 MMP14P50281 582 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 DYNLL1P63167 89 aaKnown RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 TYRO3Q06418 890 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 STX1AQ16623 288 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 FAM173BQ6P4H8 233 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 TMTC3Q6ZXV5 915 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
PACS1-211ENST00000531298 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 CTCFLQ8NI51 663 aaPredicted RBP8.7□□□□□ -1.02
PACS1-211ENST00000531298 VPS33BQ9H267 617 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms