RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RNF208Q9H0X6 261 aa27.06■■□□□ 1.92
TRAPPC4-210ENST00000531290 ZBTB21Q9ULJ3 1066 aa27.06■■□□□ 1.92
TRAPPC4-210ENST00000531290 USP17L10C9JJH3 530 aa27.05■■□□□ 1.92
TRAPPC4-210ENST00000531290 IRX3P78415 501 aaPredicted RBP27.05■■□□□ 1.92
TRAPPC4-210ENST00000531290 SLC9C2Q5TAH2 1124 aa27.05■■□□□ 1.92
TRAPPC4-210ENST00000531290 GCC1Q96CN9 775 aa27.05■■□□□ 1.92
TRAPPC4-210ENST00000531290 KIAA0100Q14667 2235 aaKnown RBP27.05■■□□□ 1.92
TRAPPC4-210ENST00000531290 DOCK1Q14185 1865 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 MKI67P46013 3256 aaKnown RBP27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 BRCA2P51587 3418 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 MAGEB6P1A0A0J9YX57 407 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 GJB1P08034 283 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 IRF5Q13568 498 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 DNAJC2Q99543 621 aaKnown RBP27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 SERPINB13Q9UIV8 391 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 TAOK2Q9UL54 1235 aa27.04■■□□□ 1.92
TRAPPC4-210ENST00000531290 ZSWIM8A7E2V4 1837 aa27.03■■□□□ 1.92
TRAPPC4-210ENST00000531290 GOLIM4O00461 696 aa27.03■■□□□ 1.92
TRAPPC4-210ENST00000531290 SHROOM1Q2M3G4 852 aaPredicted RBP27.03■■□□□ 1.92
TRAPPC4-210ENST00000531290 PXYLP1Q8TE99 480 aa27.03■■□□□ 1.92
TRAPPC4-210ENST00000531290 GH2P01242 217 aa27.02■■□□□ 1.92
TRAPPC4-210ENST00000531290 HOXA7P31268 230 aaPredicted RBP27.02■■□□□ 1.92
TRAPPC4-210ENST00000531290 RIOK1Q9BRS2 568 aaKnown RBP27.02■■□□□ 1.92
TRAPPC4-210ENST00000531290 EHD4Q9H223 541 aa27.02■■□□□ 1.92
TRAPPC4-210ENST00000531290 POLR3DP05423 398 aaPredicted RBP27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 ELNP15502 786 aa27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 PDE6AP16499 860 aa27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 GJA8P48165 433 aa27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 PDE3AQ14432 1141 aa27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 TATDN1Q6P1N9 297 aa27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 P2RX7Q99572 595 aaKnown RBP27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 CRNKL1Q9BZJ0 848 aaKnown RBP27.01■■□□□ 1.91
TRAPPC4-210ENST00000531290 MAST2Q6P0Q8 1798 aa27■■□□□ 1.91
TRAPPC4-210ENST00000531290 CERKLQ49MI3 558 aaPredicted RBP27■■□□□ 1.91
TRAPPC4-210ENST00000531290 ZNF532Q9HCE3 1301 aa26.99■■□□□ 1.91
TRAPPC4-210ENST00000531290 INHAP05111 366 aa26.99■■□□□ 1.91
TRAPPC4-210ENST00000531290 USP17L2Q6R6M4 530 aa26.99■■□□□ 1.91
TRAPPC4-210ENST00000531290 SHISA4Q96DD7 197 aa26.99■■□□□ 1.91
TRAPPC4-210ENST00000531290 UNC93B1Q9H1C4 597 aa26.99■■□□□ 1.91
TRAPPC4-210ENST00000531290 RAB3GAP1Q15042 981 aa26.98■■□□□ 1.91
TRAPPC4-210ENST00000531290 BOLA2Q9H3K6 86 aa26.98■■□□□ 1.91
TRAPPC4-210ENST00000531290 CABP5Q9NP86 173 aa26.98■■□□□ 1.91
TRAPPC4-210ENST00000531290 EMILIN3Q9NT22 766 aa26.98■■□□□ 1.91
TRAPPC4-210ENST00000531290 MORF4L1Q9UBU8 362 aa26.98■■□□□ 1.91
TRAPPC4-210ENST00000531290 PLCD1P51178 756 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 HERVK_113P62684 666 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 ABCB5Q2M3G0 1257 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 C20orf194Q5TEA3 1177 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 GPRC5AQ8NFJ5 357 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 U2AF1L4Q8WU68 220 aaKnown RBP26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 FEZ1Q99689 392 aa26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 RBBP6Q7Z6E9 1792 aaKnown RBP26.97■■□□□ 1.91
TRAPPC4-210ENST00000531290 PHIPQ8WWQ0 1821 aa26.96■■□□□ 1.91
TRAPPC4-210ENST00000531290 ATP5JP18859 108 aa26.96■■□□□ 1.91
TRAPPC4-210ENST00000531290 EDC3Q96F86 508 aaKnown RBP26.96■■□□□ 1.91
TRAPPC4-210ENST00000531290 PAG1Q9NWQ8 432 aa26.96■■□□□ 1.91
TRAPPC4-210ENST00000531290 MCM9Q9NXL9 1143 aa26.96■■□□□ 1.91
TRAPPC4-210ENST00000531290 SGPL1O95470 568 aa26.95■■□□□ 1.9
TRAPPC4-210ENST00000531290 CCAR1Q8IX12 1150 aaKnown RBP26.95■■□□□ 1.9
TRAPPC4-210ENST00000531290 GTF3C2Q8WUA4 911 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC4-210ENST00000531290 LRRCC1Q9C099 1032 aa26.95■■□□□ 1.9
TRAPPC4-210ENST00000531290 TCRBV5S4A2TA0A5A2 114 aa26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP14P54578 494 aa26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 ZYXQ15942 572 aaKnown RBP26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 DPF3Q92784 378 aa26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 GJD2Q9UKL4 321 aa26.94■■□□□ 1.9
TRAPPC4-210ENST00000531290 TFRCP02786 760 aaKnown RBP26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 CAPN2P17655 700 aa26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 SHMT1P34896 483 aa26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 DEFB118Q96PH6 123 aa26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 HAUS7Q99871 368 aa26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 RBPJLQ9UBG7 517 aa26.93■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L15C9J2P7 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L13C9JLJ4 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L11C9JVI0 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L18D6R9N7 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L22D6RA61 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L17D6RBQ6 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L19D6RCP7 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L20D6RJB6 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 USP17L24Q0WX57 530 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 LCORLQ8N3X6 602 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 SDR42E1Q8WUS8 393 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 C12orf42Q96LP6 360 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 ARMT1Q9H993 441 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 TXNRD2Q9NNW7 524 aa26.92■■□□□ 1.9
TRAPPC4-210ENST00000531290 ADD2P35612 726 aa26.91■■□□□ 1.9
TRAPPC4-210ENST00000531290 PAGR1Q9BTK6 254 aa26.91■■□□□ 1.9
TRAPPC4-210ENST00000531290 HTATIP2Q9BUP3 242 aa26.91■■□□□ 1.9
TRAPPC4-210ENST00000531290 KIAA1683Q9H0B3 1180 aa26.91■■□□□ 1.9
TRAPPC4-210ENST00000531290 DCP1AQ9NPI6 582 aaPredicted RBP26.91■■□□□ 1.9
TRAPPC4-210ENST00000531290 PTPRFP10586 1907 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 MPHOSPH10O00566 681 aaKnown RBP26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 PEX10O60683 326 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 FARP2O94887 1054 aaPredicted RBP26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 HMGCRP04035 888 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 MAPK4P31152 587 aa26.9■■□□□ 1.9
TRAPPC4-210ENST00000531290 GABPAQ06546 454 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms