RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
CAPN1-221ENST00000531068 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 ERC2O15083 957 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 HMGCS2P54868 508 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 SOX10P56693 466 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-221ENST00000531068 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-221ENST00000531068 ZBTB21Q9ULJ3 1066 aa13.23□□□□□ -0.29
CAPN1-221ENST00000531068 TTC41PQ6P2S7 1318 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 ADGRA2Q96PE1 1338 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 GDF11O95390 407 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 GH2P01242 217 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-221ENST00000531068 BCRP11274 1271 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 GCLCP48506 637 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-221ENST00000531068 PLCD1P51178 756 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 FCGRTP55899 365 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 RWDD1Q9H446 243 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-221ENST00000531068 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-221ENST00000531068 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
CAPN1-221ENST00000531068 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 MBD4O95243 580 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 JAG1P78504 1218 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 MTMR2Q13614 643 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 SLC9C1Q4G0N8 1177 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
CAPN1-221ENST00000531068 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
CAPN1-221ENST00000531068 GLRX3O76003 335 aaKnown RBP13.2□□□□□ -0.3
CAPN1-221ENST00000531068 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-221ENST00000531068 USP14P54578 494 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-221ENST00000531068 CAP1Q01518 475 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 GABPAQ06546 454 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 RAET1EQ8TD07 263 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 SDR42E1Q8WUS8 393 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 SLC4A4Q9Y6R1 1079 aa13.2□□□□□ -0.3
CAPN1-221ENST00000531068 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
CAPN1-221ENST00000531068 PRKAB2O43741 272 aa13.19□□□□□ -0.3
CAPN1-221ENST00000531068 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
CAPN1-221ENST00000531068 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
CAPN1-221ENST00000531068 GTF3C2Q8WUA4 911 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-221ENST00000531068 FEZ1Q99689 392 aa13.19□□□□□ -0.3
CAPN1-221ENST00000531068 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
CAPN1-221ENST00000531068 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-221ENST00000531068 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
CAPN1-221ENST00000531068 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
CAPN1-221ENST00000531068 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-221ENST00000531068 GNAT2P19087 354 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 SHMT1P34896 483 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 SLFNL1Q499Z3 407 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 APPBP2Q92624 585 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 COA7Q96BR5 231 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
CAPN1-221ENST00000531068 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L12C9JPN9 530 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L21D6R901 530 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 MX1P20591 662 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 CTGFP29279 349 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
CAPN1-221ENST00000531068 OTOFQ9HC10 1997 aa13.17□□□□□ -0.3
CAPN1-221ENST00000531068 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 CYP2D6P10635 497 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 GRK4P32298 578 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 NUCB1Q02818 461 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 SEPT2Q15019 361 aa13.16□□□□□ -0.3
CAPN1-221ENST00000531068 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-221ENST00000531068 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms