RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 SPP2Q13103 211 aa22.89■■□□□ 1.25
UBXN1-211ENST00000531056 OTOP1Q7RTM1 612 aa22.89■■□□□ 1.25
UBXN1-211ENST00000531056 RWDD1Q9H446 243 aaPredicted RBP22.89■■□□□ 1.25
UBXN1-211ENST00000531056 ATP8A2Q9NTI2 1148 aa22.89■■□□□ 1.25
UBXN1-211ENST00000531056 SLC45A1Q9Y2W3 748 aa22.89■■□□□ 1.25
UBXN1-211ENST00000531056 IGHDP01880 384 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 SHMT1P34896 483 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 C17orf99Q6UX52 265 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 PROCA1Q8NCQ7 364 aaPredicted RBP22.88■■□□□ 1.25
UBXN1-211ENST00000531056 PARK7Q99497 189 aaKnown RBP22.88■■□□□ 1.25
UBXN1-211ENST00000531056 WDR18Q9BV38 432 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 AS3MTQ9HBK9 375 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 ZBTB47Q9UFB7 747 aaPredicted RBP22.88■■□□□ 1.25
UBXN1-211ENST00000531056 STAP2Q9UGK3 403 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 AGTPBP1Q9UPW5 1226 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 TRIM17Q9Y577 477 aa22.88■■□□□ 1.25
UBXN1-211ENST00000531056 MYH8P13535 1937 aa22.87■■□□□ 1.25
UBXN1-211ENST00000531056 RNF113AO15541 343 aaKnown RBP22.87■■□□□ 1.25
UBXN1-211ENST00000531056 SH3D19Q5HYK7 790 aa22.87■■□□□ 1.25
UBXN1-211ENST00000531056 FBXO46Q6PJ61 603 aaPredicted RBP22.87■■□□□ 1.25
UBXN1-211ENST00000531056 APPBP2Q92624 585 aa22.87■■□□□ 1.25
UBXN1-211ENST00000531056 OSBP2Q969R2 916 aa22.87■■□□□ 1.25
UBXN1-211ENST00000531056 CCDC85CA6NKD9 419 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 ZFYP08048 801 aaPredicted RBP22.86■■□□□ 1.25
UBXN1-211ENST00000531056 CYP2C8P10632 490 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 CYP2D6P10635 497 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 HMGCS2P54868 508 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 TREML2Q5T2D2 321 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 CPA4Q9UI42 421 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 HPS5Q9UPZ3 1129 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 SLC4A4Q9Y6R1 1079 aa22.86■■□□□ 1.25
UBXN1-211ENST00000531056 GH2P01242 217 aa22.85■■□□□ 1.25
UBXN1-211ENST00000531056 PDE1AP54750 535 aa22.85■■□□□ 1.25
UBXN1-211ENST00000531056 STRBPQ96SI9 672 aaKnown RBP22.85■■□□□ 1.25
UBXN1-211ENST00000531056 BACE1P56817 501 aa22.84■■□□□ 1.25
UBXN1-211ENST00000531056 LACTBP83111 547 aaPredicted RBP22.84■■□□□ 1.25
UBXN1-211ENST00000531056 MTMR2Q13614 643 aa22.84■■□□□ 1.25
UBXN1-211ENST00000531056 CERKLQ49MI3 558 aaPredicted RBP22.84■■□□□ 1.25
UBXN1-211ENST00000531056 LNPKQ9C0E8 428 aa22.84■■□□□ 1.25
UBXN1-211ENST00000531056 EFCC1Q9HA90 598 aa22.84■■□□□ 1.25
UBXN1-211ENST00000531056 M0R2C6 588 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 BCRP11274 1271 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 C12orf60Q5U649 245 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 FSD1Q9BTV5 496 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 ARHGAP39Q9C0H5 1083 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 TAOK2Q9UL54 1235 aa22.83■■□□□ 1.25
UBXN1-211ENST00000531056 MGAMO43451 1857 aa22.83■■□□□ 1.24
UBXN1-211ENST00000531056 NUCB1Q02818 461 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 ABCB5Q2M3G0 1257 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 LRRFIP1Q32MZ4 808 aaKnown RBP22.82■■□□□ 1.24
UBXN1-211ENST00000531056 SLC44A5Q8NCS7 719 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 SWAP70Q9UH65 585 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 PTPN22Q9Y2R2 807 aa22.82■■□□□ 1.24
UBXN1-211ENST00000531056 CYP2D7A0A087X1C5 515 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 GSG1L2A8MUP6 293 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 C19orf81C9J6K1 198 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 USP17L10C9JJH3 530 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 USP17L12C9JPN9 530 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 USP17L21D6R901 530 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 SMIM22K7EJ46 135 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 GPAA1O43292 621 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 CTGFP29279 349 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 GUCY1A2P33402 732 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 IRX6P78412 446 aaPredicted RBP22.81■■□□□ 1.24
UBXN1-211ENST00000531056 B4GALNT3Q6L9W6 998 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 CTR9Q6PD62 1173 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 CHD1LQ86WJ1 897 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 HTTP42858 3142 aa22.81■■□□□ 1.24
UBXN1-211ENST00000531056 ZMYM1Q5SVZ6 1142 aa22.8■■□□□ 1.24
UBXN1-211ENST00000531056 DDRGK1Q96HY6 314 aa22.8■■□□□ 1.24
UBXN1-211ENST00000531056 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
UBXN1-211ENST00000531056 PNMA3Q9UL41 463 aa22.8■■□□□ 1.24
UBXN1-211ENST00000531056 KIF22Q14807 665 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 RAB3GAP1Q15042 981 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 ARHGEF6Q15052 776 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 GIMAP6Q6P9H5 292 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 C16orf86Q6ZW13 317 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 AMOTL1Q8IY63 956 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 SEC62Q99442 399 aaKnown RBP22.79■■□□□ 1.24
UBXN1-211ENST00000531056 EPB41L4AQ9HCS5 686 aaPredicted RBP22.79■■□□□ 1.24
UBXN1-211ENST00000531056 CABP5Q9NP86 173 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 TMOD4Q9NZQ9 345 aa22.79■■□□□ 1.24
UBXN1-211ENST00000531056 PABPC4Q13310 644 aaKnown RBP eCLIP22.78■■□□□ 1.244e-10■■■■□ 23.7
UBXN1-211ENST00000531056 SBK1Q52WX2 424 aa22.78■■□□□ 1.24
UBXN1-211ENST00000531056 SMCR8Q8TEV9 937 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-211ENST00000531056 EVI5LQ96CN4 794 aa22.78■■□□□ 1.24
UBXN1-211ENST00000531056 EMILIN3Q9NT22 766 aa22.78■■□□□ 1.24
UBXN1-211ENST00000531056 ROBO3Q96MS0 1386 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 GREB1LQ9C091 1923 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-211ENST00000531056 GNRH1P01148 92 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 GNAT2P19087 354 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 HOXA7P31268 230 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-211ENST00000531056 CDK8P49336 464 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 SEPT2Q15019 361 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 USP17L2Q6R6M4 530 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 TRIM47Q96LD4 638 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 C12orf42Q96LP6 360 aa22.77■■□□□ 1.24
UBXN1-211ENST00000531056 ASCC2Q9H1I8 757 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-211ENST00000531056 OSBPP22059 807 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms