RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FAM227BQ96M60 508 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 GAS2L1Q99501 681 aaPredicted RBP6.6□□□□□ -1.35
PCF11-205ENST00000530906 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 LMBRD1Q9NUN5 540 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 CTNNA3Q9UI47 895 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ZDHHC9Q9Y397 364 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 CHMP3Q9Y3E7 222 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 PCDHB11Q9Y5F2 797 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 MYH7P12883 1935 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ATRNO75882 1429 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 MROH5Q6ZUA9 1318 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 WDR19Q8NEZ3 1342 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 A0A1B0GUL7 405 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 SOCS7O14512 581 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 RNF113AO15541 343 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 STX6O43752 255 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 LETM1O95202 739 aaPredicted RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 THBS1P07996 1170 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 IFIT1P09914 478 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 UQCRFS1P1P0C7P4 283 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 ZSCAN22P10073 491 aaPredicted RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 BCRP11274 1271 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 HMGB2P26583 209 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 EIF5P55010 431 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 GORABQ5T7V8 394 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 CLEC4GQ6UXB4 293 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 ZNF34Q8IZ26 560 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 ANP32BQ92688 251 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 NEUROD6Q96NK8 337 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 LLPHQ9BRT6 129 aaKnown RBP6.59□□□□□ -1.35
PCF11-205ENST00000530906 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCF11-205ENST00000530906 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 ARHGEF10LQ9HCE6 1279 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 ZNF652Q9Y2D9 606 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 BCORQ6W2J9 1755 aa6.59□□□□□ -1.35
PCF11-205ENST00000530906 COL5A3P25940 1745 aaPredicted RBP6.59□□□□□ -1.36
PCF11-205ENST00000530906 CARMIL3Q8ND23 1372 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 IRS4O14654 1257 aaPredicted RBP6.58□□□□□ -1.36
PCF11-205ENST00000530906 IGSF3O75054 1194 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 ITGB2P05107 769 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 ATP2B3Q16720 1220 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 TTC39AQ5SRH9 613 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 TMED8Q6PL24 325 aaPredicted RBP6.58□□□□□ -1.36
PCF11-205ENST00000530906 TAS1R3Q7RTX0 852 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 TTLL11Q8NHH1 800 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 NEK1Q96PY6 1258 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 DNAJC2Q99543 621 aaKnown RBP6.58□□□□□ -1.36
PCF11-205ENST00000530906 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 RIPOR2Q9Y4F9 1068 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.58□□□□□ -1.36
PCF11-205ENST00000530906 RIC1Q4ADV7 1423 aa6.58□□□□□ -1.36
PCF11-205ENST00000530906 ZMYM6O95789 1325 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 CNTNAP4Q9C0A0 1308 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 LOC102724428A0A0B4J2F2 783 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 GOLIM4O00461 696 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 F13A1P00488 732 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 F11P03951 625 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
PCF11-205ENST00000530906 SYT1P21579 422 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 SIK1P57059 783 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 HMGN5P82970 282 aaKnown RBP6.57□□□□□ -1.36
PCF11-205ENST00000530906 PKP1Q13835 747 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 PUM3Q15397 648 aaKnown RBP6.57□□□□□ -1.36
PCF11-205ENST00000530906 VPS72Q15906 364 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 ADCK5Q3MIX3 580 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 LRRC24Q50LG9 513 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 METTL24Q5JXM2 366 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 ATL3Q6DD88 541 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 LDHAL6AQ6ZMR3 332 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 DDX46Q7L014 1031 aaKnown RBP6.57□□□□□ -1.36
PCF11-205ENST00000530906 ZNF589Q86UQ0 364 aaPredicted RBP6.57□□□□□ -1.36
PCF11-205ENST00000530906 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 LPIN2Q92539 896 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 ZNF592Q92610 1267 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 APPBP2Q92624 585 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 FAM89AQ96GI7 184 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 XAGE2Q96GT9 111 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 TRERF1Q96PN7 1200 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 SLC4A9Q96Q91 983 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 AGXT2Q9BYV1 514 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
PCF11-205ENST00000530906 TRMT112Q9UI30 125 aaKnown RBP6.57□□□□□ -1.36
PCF11-205ENST00000530906 ELP1O95163 1332 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 SPATA31A6Q5VVP1 1343 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 SCN7AQ01118 1682 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 PRPF40AO75400 957 aaKnown RBP6.56□□□□□ -1.36
PCF11-205ENST00000530906 PDE8BO95263 885 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 GNRH1P01148 92 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 IL2RAP01589 272 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 MX2P20592 715 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 GJB2P29033 226 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 ARID4AP29374 1257 aaPredicted RBP6.56□□□□□ -1.36
PCF11-205ENST00000530906 CRKLP46109 303 aaKnown RBP6.56□□□□□ -1.36
PCF11-205ENST00000530906 EVCP57679 992 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 UBE2HP62256 183 aa6.56□□□□□ -1.36
PCF11-205ENST00000530906 UBE3CQ15386 1083 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms