RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 GGA3Q9NZ52 723 aa16.41■□□□□ 0.22
NXF1-207ENST00000530875 SHMT1P34896 483 aa16.4■□□□□ 0.22
NXF1-207ENST00000530875 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
NXF1-207ENST00000530875 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
NXF1-207ENST00000530875 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
NXF1-207ENST00000530875 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
NXF1-207ENST00000530875 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
NXF1-207ENST00000530875 NMT2O60551 498 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 TSPY3P0CV98 308 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 TSPY8P0CW00 308 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 EPHX2P34913 555 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
NXF1-207ENST00000530875 ME3Q16798 604 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 IQCA1Q86XH1 822 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 ZSCAN10Q96SZ4 725 aaPredicted RBP16.39■□□□□ 0.21
NXF1-207ENST00000530875 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 LY9Q9HBG7 655 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 PGAP2Q9UHJ9 254 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 ERICH2A1L162 156 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 APOBEC3FQ8IUX4 373 aaKnown RBP16.39■□□□□ 0.21
NXF1-207ENST00000530875 TNKSO95271 1327 aa16.39■□□□□ 0.21
NXF1-207ENST00000530875 NT5C2P49902 561 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 WTAPQ15007 396 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
NXF1-207ENST00000530875 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
NXF1-207ENST00000530875 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
NXF1-207ENST00000530875 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 BRPF3Q9ULD4 1205 aa16.38■□□□□ 0.21
NXF1-207ENST00000530875 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
NXF1-207ENST00000530875 KLF18A0A0U1RQI7 1052 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 POTECB2RU33 542 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 STK3Q13188 491 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 SEC23AQ15436 765 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
NXF1-207ENST00000530875 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
NXF1-207ENST00000530875 AKR1B1P15121 316 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 LIFRP42702 1097 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 EVCP57679 992 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 TATDN1Q6P1N9 297 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
NXF1-207ENST00000530875 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 NEDD1Q8NHV4 660 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
NXF1-207ENST00000530875 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
NXF1-207ENST00000530875 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
NXF1-207ENST00000530875 IQCA1LA6NCM1 817 aa16.36■□□□□ 0.21
NXF1-207ENST00000530875 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
NXF1-207ENST00000530875 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
NXF1-207ENST00000530875 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
NXF1-207ENST00000530875 PITPNM2Q9BZ72 1349 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 CUL4AQ13619 759 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 CERKLQ49MI3 558 aaPredicted RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 IFIT1BQ5T764 474 aaKnown RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 PRAMEF18Q5VWM3 479 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 CCDC83Q8IWF9 413 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 ZNF274Q96GC6 653 aaPredicted RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
NXF1-207ENST00000530875 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 ST3GAL1Q11201 340 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 SHROOM1Q2M3G4 852 aaPredicted RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 EAPPQ56P03 285 aaPredicted RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 NBPF12Q5TAG4 269 aaPredicted RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
NXF1-207ENST00000530875 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
NXF1-207ENST00000530875 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 TBC1D12O60347 775 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 GDF11O95390 407 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
NXF1-207ENST00000530875 RCSD1Q6JBY9 416 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 MYL10Q9BUA6 226 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
NXF1-207ENST00000530875 SCN4AP35499 1836 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 PFKFB2O60825 505 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 RXRAP19793 462 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.21
NXF1-207ENST00000530875 SCRN1Q12765 414 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 GTF3C6Q969F1 213 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 CEP95Q96GE4 821 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 STX8Q9UNK0 236 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.21
NXF1-207ENST00000530875 DTNBO60941 627 aa16.33■□□□□ 0.2
NXF1-207ENST00000530875 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
NXF1-207ENST00000530875 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.2
NXF1-207ENST00000530875 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
NXF1-207ENST00000530875 DGKHQ86XP1 1220 aa16.33■□□□□ 0.2
NXF1-207ENST00000530875 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms