RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 CCDC94Q9BW85 323 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 CETN3O15182 167 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 ZNF75DP51815 510 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 TGFBRAP1Q8WUH2 860 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 RNF34Q969K3 372 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 HSPA2P54652 639 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 E7EWF7 191 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 PSMC4P43686 418 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 USH1GQ495M9 461 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 SYCE1Q8N0S2 351 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 MYCT1Q8N699 235 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 IQCDQ96DY2 449 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 A1BGP04217 495 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 ERO1AQ96HE7 468 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 AZI2Q9H6S1 392 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 NKIRAS1Q9NYS0 192 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 NEO1Q92859 1461 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 GNA14O95837 355 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 MNAT1P51948 309 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 PTPRTO14522 1441 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 CRCPO75575 148 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 CIB2O75838 187 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 ZNF202O95125 648 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 ATP5JP18859 108 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 SLC1A4P43007 532 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 C8orf74Q6P047 294 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 CLASP1Q7Z460 1538 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 ZYXQ15942 572 aaKnown RBP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 INF2Q27J81 1249 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 KRT40Q6A162 431 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 LARGE2Q8N3Y3 721 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-227ENST00000530748 AS3MTQ9HBK9 375 aa9.44□□□□□ -0.9
CTNND1-227ENST00000530748 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 GCNT3O95395 438 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 EVCP57679 992 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 SLC9C1Q4G0N8 1177 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MAPKAPK5Q8IW41 473 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 IFT20Q8IY31 132 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 NIM1KQ8IY84 436 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 GPATCH11Q8N954 259 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MYOM2P54296 1465 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 DAPK3O43293 454 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 UAP1Q16222 522 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MICALL1Q8N3F8 863 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 AFAP1L1Q8TED9 768 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MRPL44Q9H9J2 332 aaKnown RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 BCRP11274 1271 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 DNM2P50570 870 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 CCT6BQ92526 530 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 ORAI2Q96SN7 254 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MYL10Q9BUA6 226 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 SFMBT2Q5VUG0 894 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 MCTP2Q6DN12 878 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 PHKBQ93100 1093 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 ZSCAN10Q96SZ4 725 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 KDM5DQ9BY66 1539 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 TLDC2A0PJX2 215 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 EBAG9O00559 213 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 RASA3Q14644 834 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 ERCC6LQ2NKX8 1250 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 PPP1R21Q6ZMI0 780 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 NLRX1Q86UT6 975 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 TRIM6Q9C030 488 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-227ENST00000530748 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
CTNND1-227ENST00000530748 TMEM2Q9UHN6 1383 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 ABCC4O15439 1325 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 ZMYM6O95789 1325 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 PRDM1O75626 825 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 ITIH3Q06033 890 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
CTNND1-227ENST00000530748 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-227ENST00000530748 GABPB2Q8TAK5 448 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-227ENST00000530748 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 NOD1Q9Y239 953 aa9.42□□□□□ -0.9
CTNND1-227ENST00000530748 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms