RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTSF-208ENST00000530565 DDRGK1Q96HY6 314 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 ARHGAP39Q9C0H5 1083 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 PI4KBQ9UBF8 816 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 PALD1Q9ULE6 856 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 BAZ2AQ9UIF9 1905 aaKnown RBP10.26□□□□□ -0.77
CTSF-208ENST00000530565 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
CTSF-208ENST00000530565 CCL15-CCL14A0A0B4J2E2 113 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 H0YGN5 161 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 APPP05067 770 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
CTSF-208ENST00000530565 HLA-DOAP06340 250 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
CTSF-208ENST00000530565 MAP3K10Q02779 954 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 TAF1CQ15572 869 aaPredicted RBP10.25□□□□□ -0.77
CTSF-208ENST00000530565 CCL15Q16663 113 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 SLC4A8Q2Y0W8 1093 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 GIMAP6Q6P9H5 292 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 MIGA2Q7L4E1 593 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 TTC6Q86TZ1 520 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 ZNF589Q86UQ0 364 aaPredicted RBP10.25□□□□□ -0.77
CTSF-208ENST00000530565 SH3TC2Q8TF17 1288 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 RUFY2Q8WXA3 655 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 ZNF341Q9BYN7 854 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 EPB41L4AQ9HCS5 686 aaPredicted RBP10.25□□□□□ -0.77
CTSF-208ENST00000530565 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 RAD50Q92878 1312 aa10.25□□□□□ -0.77
CTSF-208ENST00000530565 USP17L12C9JPN9 530 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 USP17L21D6R901 530 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 FOXP2O15409 715 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 TBC1D12O60347 775 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 TDO2P48775 406 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 PLCD1P51178 756 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 NBPF11Q86T75 865 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
CTSF-208ENST00000530565 FOXP4Q8IVH2 680 aaPredicted RBP10.24□□□□□ -0.77
CTSF-208ENST00000530565 AMOTL1Q8IY63 956 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 IFNL3Q8IZI9 196 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 EHD4Q9H223 541 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 IL25Q9H293 177 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 ZFYVE28Q9HCC9 887 aa10.24□□□□□ -0.77
CTSF-208ENST00000530565 ARPP21Q9UBL0 812 aaPredicted RBP10.24□□□□□ -0.77
CTSF-208ENST00000530565 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
CTSF-208ENST00000530565 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 TLR2O60603 784 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 CDC45O75419 566 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
CTSF-208ENST00000530565 CYP2D6P10635 497 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 HSPD1P10809 573 aaKnown RBP10.23□□□□□ -0.77
CTSF-208ENST00000530565 CTGFP29279 349 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 GTF2A2P52657 109 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 SBK1Q52WX2 424 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 C12orf60Q5U649 245 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 CRACR2BQ8N4Y2 399 aaPredicted RBP10.23□□□□□ -0.77
CTSF-208ENST00000530565 WRNIP1Q96S55 665 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 NAPBQ9H115 298 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 PRO3102Q9H379 93 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.23□□□□□ -0.77
CTSF-208ENST00000530565 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 ZNF112Q9UJU3 913 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 CEP290O15078 2479 aa10.23□□□□□ -0.77
CTSF-208ENST00000530565 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 PHF20L1A8MW92 1017 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 SGSM2O43147 1006 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 LACTBP83111 547 aaPredicted RBP10.22□□□□□ -0.77
CTSF-208ENST00000530565 EVX2Q03828 476 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 MTFR1Q15390 333 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 ALX1Q15699 326 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 CASC1Q6TDU7 716 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 UBE2Q1Q7Z7E8 422 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
CTSF-208ENST00000530565 ZCCHC17Q9NP64 241 aaKnown RBP10.22□□□□□ -0.77
CTSF-208ENST00000530565 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
CTSF-208ENST00000530565 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 BTBD19C9JJ37 291 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 SMIM22K7EJ46 135 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 EIF5BO60841 1220 aaKnown RBP10.21□□□□□ -0.77
CTSF-208ENST00000530565 FGAP02671 866 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 INPP5BP32019 993 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 GABPAQ06546 454 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 ARHGEF6Q15052 776 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 NOL9Q5SY16 702 aaKnown RBP10.21□□□□□ -0.77
CTSF-208ENST00000530565 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 C17orf99Q6UX52 265 aa10.21□□□□□ -0.77
CTSF-208ENST00000530565 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.77
CTSF-208ENST00000530565 DYNLL2Q96FJ2 89 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms