RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 VEGFBP49765 207 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 HAND2P61296 217 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 CTDSPL2Q05D32 466 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 GRM1Q13255 1194 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 CERKLQ49MI3 558 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-218ENST00000530442 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-218ENST00000530442 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
CAPN1-218ENST00000530442 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
CAPN1-218ENST00000530442 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
CAPN1-218ENST00000530442 AOC2O75106 756 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 PRDM1O75626 825 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 GH2P01242 217 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 ZBTB48P10074 688 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-218ENST00000530442 AKR1B1P15121 316 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 PTPRAP18433 802 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 RASA1P20936 1047 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 ECE1P42892 770 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
CAPN1-218ENST00000530442 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 ERO1BQ86YB8 467 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 DNAJC5GQ8N7S2 189 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 PLIN4Q96Q06 1357 aa13.06□□□□□ -0.32
CAPN1-218ENST00000530442 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 PPATQ06203 517 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 PPIL2Q13356 520 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 ABCB5Q2M3G0 1257 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
CAPN1-218ENST00000530442 RBM8AQ9Y5S9 174 aaKnown RBP13.05□□□□□ -0.32
CAPN1-218ENST00000530442 ZNF213O14771 459 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 IRF6O14896 467 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 SLC3A2P08195 630 aaKnown RBP13.04□□□□□ -0.32
CAPN1-218ENST00000530442 ASNSP08243 561 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 FGRP09769 529 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 PDE4BQ07343 736 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 NOGQ13253 232 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 STAG1Q8WVM7 1258 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-218ENST00000530442 NEDD4P46934 1319 aa13.04□□□□□ -0.32
CAPN1-218ENST00000530442 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 MPHOSPH10O00566 681 aaKnown RBP13.03□□□□□ -0.32
CAPN1-218ENST00000530442 CYP21A2P08686 494 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 SEPT2Q15019 361 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
CAPN1-218ENST00000530442 AKNAD1Q5T1N1 836 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN1-218ENST00000530442 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 ZHX2Q9Y6X8 837 aa13.03□□□□□ -0.32
CAPN1-218ENST00000530442 ORC4O43929 436 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-218ENST00000530442 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 MS4A4AQ96JQ5 239 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
CAPN1-218ENST00000530442 IGKV6D-41A0A0C4DH26 115 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 TRIM75PA6NK02 468 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
CAPN1-218ENST00000530442 MAP2K2P36507 400 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 ICA1Q05084 483 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 DGKZQ13574 1117 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 ZNF280CQ8ND82 737 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 WDR18Q9BV38 432 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 TBC1D2Q9BYX2 928 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 RNF41Q9H4P4 317 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-218ENST00000530442 AS3MTQ9HBK9 375 aa13.01□□□□□ -0.33
CAPN1-218ENST00000530442 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 A0A0G2JLL6 359 aaPredicted RBP13□□□□□ -0.33
CAPN1-218ENST00000530442 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
CAPN1-218ENST00000530442 CXCL11O14625 94 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 SLC27A2O14975 620 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 REC8O95072 547 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 TSPY3P0CV98 308 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 TSPY8P0CW00 308 aa13□□□□□ -0.33
CAPN1-218ENST00000530442 GTF2A2P52657 109 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms