RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
CTSB-217ENST00000530296 DDTLA6NHG4 134 aaPredicted RBP16.87■□□□□ 0.29
CTSB-217ENST00000530296 ZMYM1Q5SVZ6 1142 aa16.87■□□□□ 0.29
CTSB-217ENST00000530296 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
CTSB-217ENST00000530296 PUS7LQ9H0K6 701 aaKnown RBP16.87■□□□□ 0.29
CTSB-217ENST00000530296 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
CTSB-217ENST00000530296 SRRDQ9UH36 339 aa16.87■□□□□ 0.29
CTSB-217ENST00000530296 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
CTSB-217ENST00000530296 MAP3K10Q02779 954 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
CTSB-217ENST00000530296 RAET1EQ8TD07 263 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 SH3TC2Q8TF17 1288 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 TRIM47Q96LD4 638 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
CTSB-217ENST00000530296 HTATIP2Q9BUP3 242 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 ZNF112Q9UJU3 913 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
CTSB-217ENST00000530296 SLC4A4Q9Y6R1 1079 aa16.86■□□□□ 0.29
CTSB-217ENST00000530296 GPAA1O43292 621 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
CTSB-217ENST00000530296 GRK4P32298 578 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 PSMC4P43686 418 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 UBXN2AP68543 259 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
CTSB-217ENST00000530296 MIGA2Q7L4E1 593 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 PARK7Q99497 189 aaKnown RBP16.85■□□□□ 0.29
CTSB-217ENST00000530296 EHD4Q9H223 541 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■□□□□ 9.8
CTSB-217ENST00000530296 DCP1AQ9NPI6 582 aaPredicted RBP16.85■□□□□ 0.29
CTSB-217ENST00000530296 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
CTSB-217ENST00000530296 PDHXO00330 501 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 CXCL11O14625 94 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
CTSB-217ENST00000530296 SDSP20132 328 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 SDR42E1Q8WUS8 393 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 ARHGAP39Q9C0H5 1083 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 SAP30BPQ9UHR5 308 aaKnown RBP16.84■□□□□ 0.29
CTSB-217ENST00000530296 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
CTSB-217ENST00000530296 CEP290O15078 2479 aa16.83■□□□□ 0.28
CTSB-217ENST00000530296 CTNND1O60716 968 aaKnown RBP16.83■□□□□ 0.28
CTSB-217ENST00000530296 GJB1P08034 283 aa16.83■□□□□ 0.28
CTSB-217ENST00000530296 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.28
CTSB-217ENST00000530296 METTL16Q86W50 562 aaKnown RBP16.83■□□□□ 0.28
CTSB-217ENST00000530296 ARPP21Q9UBL0 812 aaPredicted RBP16.83■□□□□ 0.28
CTSB-217ENST00000530296 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
CTSB-217ENST00000530296 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
CTSB-217ENST00000530296 H0YGN5 161 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 M0R2C6 588 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 CHGBP05060 677 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 APPP05067 770 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 OSBPP22059 807 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 GJA8P48165 433 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 FCGRTP55899 365 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 SLAIN1Q8ND83 568 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 DPF3Q92784 378 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 PICK1Q9NRD5 415 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 CPA4Q9UI42 421 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 NR2E3Q9Y5X4 410 aa16.82■□□□□ 0.28
CTSB-217ENST00000530296 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 MYH1P12882 1939 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 PRKAB2O43741 272 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 GSPT1P15170 499 aaKnown RBP16.81■□□□□ 0.28
CTSB-217ENST00000530296 INPP5BP32019 993 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 GINM1Q9NU53 330 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
CTSB-217ENST00000530296 SWAP70Q9UH65 585 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 SLC45A1Q9Y2W3 748 aa16.81■□□□□ 0.28
CTSB-217ENST00000530296 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 ADGRA2Q96PE1 1338 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 GSG1L2A8MUP6 293 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 PHF20L1A8MW92 1017 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 MYCP01106 439 aaPredicted RBP16.8■□□□□ 0.28
CTSB-217ENST00000530296 TDO2P48775 406 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
CTSB-217ENST00000530296 SBK1Q52WX2 424 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 SCYL3Q8IZE3 742 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
CTSB-217ENST00000530296 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
CTSB-217ENST00000530296 CCDC171Q6TFL3 1326 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 USP17L12C9JPN9 530 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 USP17L21D6R901 530 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 MTFR1Q15390 333 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 RNF208Q9H0X6 261 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 NAPBQ9H115 298 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
CTSB-217ENST00000530296 RAD50Q92878 1312 aa16.78■□□□□ 0.28
CTSB-217ENST00000530296 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms