RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SPDYE2Q495Y8 402 aa19.46■□□□□ 0.71
PACS1-209ENST00000529757 CCDC178Q5BJE1 867 aa19.46■□□□□ 0.71
PACS1-209ENST00000529757 DPF2Q92785 391 aa19.46■□□□□ 0.71
PACS1-209ENST00000529757 TNPO1Q92973 898 aaKnown RBP19.46■□□□□ 0.71
PACS1-209ENST00000529757 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
PACS1-209ENST00000529757 MYOZ2Q9NPC6 264 aa19.46■□□□□ 0.71
PACS1-209ENST00000529757 ZNF70Q9UC06 446 aaPredicted RBP19.46■□□□□ 0.71
PACS1-209ENST00000529757 NID2Q14112 1375 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 COL2A1P02458 1487 aaPredicted RBP19.45■□□□□ 0.7
PACS1-209ENST00000529757 PTPDC1A2A3K4 754 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 CTDNEP1O95476 244 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 BRD1O95696 1058 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 PDCP20941 246 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 SYT1P21579 422 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 ZSCAN29Q8IWY8 852 aaPredicted RBP19.45■□□□□ 0.7
PACS1-209ENST00000529757 ZNF654Q8IZM8 581 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 TCP11L1Q9NUJ3 509 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 ZNF541Q9H0D2 1346 aa19.45■□□□□ 0.7
PACS1-209ENST00000529757 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 CPLX1O14810 134 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 MYO1BO43795 1136 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 NMT2O60551 498 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 YBX3P16989 372 aaKnown RBP eCLIP19.44■□□□□ 0.7
PACS1-209ENST00000529757 MYL10Q9BUA6 226 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 TAOK2Q9UL54 1235 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 ZDHHC9Q9Y397 364 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 KIF3AQ9Y496 699 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 WDR33Q9C0J8 1336 aaKnown RBP19.44■□□□□ 0.7
PACS1-209ENST00000529757 ATRNL1Q5VV63 1379 aa19.44■□□□□ 0.7
PACS1-209ENST00000529757 DICER1Q9UPY3 1922 aaKnown RBP19.44■□□□□ 0.7
PACS1-209ENST00000529757 DDTLA6NHG4 134 aaPredicted RBP19.43■□□□□ 0.7
PACS1-209ENST00000529757 STX6O43752 255 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 PDIA4P13667 645 aaKnown RBP19.43■□□□□ 0.7
PACS1-209ENST00000529757 RXRAP19793 462 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 CPLX2Q6PUV4 134 aaKnown RBP19.43■□□□□ 0.7
PACS1-209ENST00000529757 CATIPQ7Z7H3 387 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 NEDD1Q8NHV4 660 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 DDX11Q96FC9 970 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 PI4KBQ9UBF8 816 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 SHTN1A0MZ66 631 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 NFKBIBQ15653 356 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 LARP1BQ659C4 914 aaKnown RBP19.43■□□□□ 0.7
PACS1-209ENST00000529757 SH3BP5LQ7L8J4 393 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 DGKHQ86XP1 1220 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 CCDC144CPQ8IYA2 1237 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 CRACR2BQ8N4Y2 399 aaPredicted RBP19.43■□□□□ 0.7
PACS1-209ENST00000529757 FAM184AQ8NB25 1140 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 IL17RBQ9NRM6 502 aa19.43■□□□□ 0.7
PACS1-209ENST00000529757 TCP10L2B9ZVM9 353 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 WNT10BO00744 389 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 CDKL5O76039 1030 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 RTN1Q16799 776 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 RCSD1Q6JBY9 416 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 MICALL2Q8IY33 904 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 ANKS1AQ92625 1134 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 VEZTQ9HBM0 779 aa19.42■□□□□ 0.7
PACS1-209ENST00000529757 DDAH1O94760 285 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CALM1P0DP23 149 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CALM2P0DP24 149 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CALM3P0DP25 149 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CDC27P30260 824 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 SHMT1P34896 483 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 ADD1P35611 737 aaKnown RBP19.41■□□□□ 0.7
PACS1-209ENST00000529757 FOXP4Q8IVH2 680 aaPredicted RBP19.41■□□□□ 0.7
PACS1-209ENST00000529757 NUP133Q8WUM0 1156 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 FAM151AQ8WW52 585 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 PLIN4Q96Q06 1357 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 TRIM34Q9BYJ4 488 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CNOT7Q9UIV1 285 aaKnown RBP19.41■□□□□ 0.7
PACS1-209ENST00000529757 SBF1O95248 1867 aa19.41■□□□□ 0.7
PACS1-209ENST00000529757 CCDC196A0A1B0GTZ2 297 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 PPP2R5BQ15173 497 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 NBPF9Q3BBW0 867 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 GPC2Q8N158 579 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 FANCBQ8NB91 859 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 FAM217BQ9NTX9 383 aaPredicted RBP19.4■□□□□ 0.7
PACS1-209ENST00000529757 SIPA1L1O43166 1804 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 ZSCAN22P10073 491 aaPredicted RBP19.4■□□□□ 0.7
PACS1-209ENST00000529757 FOXD4L5Q5VV16 416 aaPredicted RBP19.4■□□□□ 0.7
PACS1-209ENST00000529757 FAM83AQ86UY5 434 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 FOXD4L4Q8WXT5 416 aaPredicted RBP19.4■□□□□ 0.7
PACS1-209ENST00000529757 KAT14Q9H8E8 782 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 RNF181Q9P0P0 153 aa19.4■□□□□ 0.7
PACS1-209ENST00000529757 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
PACS1-209ENST00000529757 TROAPQ12815 778 aa19.39■□□□□ 0.69
PACS1-209ENST00000529757 RBM26Q5T8P6 1007 aaKnown RBP19.39■□□□□ 0.69
PACS1-209ENST00000529757 CLEC17AQ6ZS10 378 aa19.39■□□□□ 0.69
PACS1-209ENST00000529757 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
PACS1-209ENST00000529757 CSRNP1Q96S65 589 aa19.39■□□□□ 0.69
PACS1-209ENST00000529757 DNAJC18Q9H819 358 aa19.39■□□□□ 0.69
PACS1-209ENST00000529757 MTMR6Q9Y217 621 aa19.39■□□□□ 0.69
PACS1-209ENST00000529757 MYH8P13535 1937 aa19.38■□□□□ 0.69
PACS1-209ENST00000529757 H7C1D1 291 aa19.38■□□□□ 0.69
PACS1-209ENST00000529757 PPFIA3O75145 1194 aa19.38■□□□□ 0.69
PACS1-209ENST00000529757 AKR1B1P15121 316 aa19.38■□□□□ 0.69
PACS1-209ENST00000529757 NTRK3Q16288 839 aa19.38■□□□□ 0.69
PACS1-209ENST00000529757 CCDC17Q96LX7 622 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms