RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 MORF4L1Q9UBU8 362 aa25.12■■□□□ 1.61
SF3B2-207ENST00000529577 BACE1P56817 501 aa25.11■■□□□ 1.61
SF3B2-207ENST00000529577 CCDC158Q5M9N0 1113 aa25.11■■□□□ 1.61
SF3B2-207ENST00000529577 CEP85Q6P2H3 762 aa25.1■■□□□ 1.61
SF3B2-207ENST00000529577 MIER1Q8N108 512 aa25.1■■□□□ 1.61
SF3B2-207ENST00000529577 DHX36Q9H2U1 1008 aaKnown RBP25.1■■□□□ 1.61
SF3B2-207ENST00000529577 PNMA3Q9UL41 463 aa25.1■■□□□ 1.61
SF3B2-207ENST00000529577 TAOK2Q9UL54 1235 aa25.1■■□□□ 1.61
SF3B2-207ENST00000529577 GCLCP48506 637 aaPredicted RBP25.09■■□□□ 1.61
SF3B2-207ENST00000529577 EVX2Q03828 476 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 Q3C1V9 767 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 COA7Q96BR5 231 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 TBC1D2Q9BYX2 928 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 EMILIN3Q9NT22 766 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 RBPJLQ9UBG7 517 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 ZBTB21Q9ULJ3 1066 aa25.09■■□□□ 1.61
SF3B2-207ENST00000529577 BAG3O95817 575 aa25.08■■□□□ 1.61
SF3B2-207ENST00000529577 HOXA7P31268 230 aaPredicted RBP25.08■■□□□ 1.61
SF3B2-207ENST00000529577 OS9Q13438 667 aaPredicted RBP25.08■■□□□ 1.61
SF3B2-207ENST00000529577 FOXP4Q8IVH2 680 aaPredicted RBP25.08■■□□□ 1.61
SF3B2-207ENST00000529577 ITPRIPQ8IWB1 547 aa25.08■■□□□ 1.61
SF3B2-207ENST00000529577 MIGA1Q8NAN2 632 aa25.08■■□□□ 1.61
SF3B2-207ENST00000529577 TRIB2Q92519 343 aa25.08■■□□□ 1.61
SF3B2-207ENST00000529577 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.08■■□□□ 1.61
SF3B2-207ENST00000529577 CYP7A1P22680 504 aa25.07■■□□□ 1.6
SF3B2-207ENST00000529577 HNRNPUQ00839 825 aaKnown RBP eCLIP25.07■■□□□ 1.6
SF3B2-207ENST00000529577 ASNSP08243 561 aa25.06■■□□□ 1.6
SF3B2-207ENST00000529577 PANK1Q8TE04 598 aa25.06■■□□□ 1.6
SF3B2-207ENST00000529577 PAWRQ96IZ0 340 aaKnown RBP25.06■■□□□ 1.6
SF3B2-207ENST00000529577 AS3MTQ9HBK9 375 aa25.06■■□□□ 1.6
SF3B2-207ENST00000529577 EXOC6BQ9Y2D4 811 aa25.06■■□□□ 1.6
SF3B2-207ENST00000529577 TFRCP02786 760 aaKnown RBP25.05■■□□□ 1.6
SF3B2-207ENST00000529577 PLCG2P16885 1265 aa25.05■■□□□ 1.6
SF3B2-207ENST00000529577 HERVK_113P62684 666 aa25.05■■□□□ 1.6
SF3B2-207ENST00000529577 NOL10Q9BSC4 688 aaKnown RBP25.05■■□□□ 1.6
SF3B2-207ENST00000529577 PORCNQ9H237 461 aa25.05■■□□□ 1.6
SF3B2-207ENST00000529577 CNMDO75829 334 aa25.04■■□□□ 1.6
SF3B2-207ENST00000529577 TATDN1Q6P1N9 297 aa25.04■■□□□ 1.6
SF3B2-207ENST00000529577 MAGEB6Q8N7X4 407 aa25.04■■□□□ 1.6
SF3B2-207ENST00000529577 USP6NLQ92738 828 aa25.04■■□□□ 1.6
SF3B2-207ENST00000529577 HTATIP2Q9BUP3 242 aa25.04■■□□□ 1.6
SF3B2-207ENST00000529577 USP17L10C9JJH3 530 aa25.03■■□□□ 1.6
SF3B2-207ENST00000529577 IDH1O75874 414 aaKnown RBP25.03■■□□□ 1.6
SF3B2-207ENST00000529577 GH2P01242 217 aa25.03■■□□□ 1.6
SF3B2-207ENST00000529577 HMGCRP04035 888 aa25.03■■□□□ 1.6
SF3B2-207ENST00000529577 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.6
SF3B2-207ENST00000529577 MAP3K21Q5TCX8 1036 aa25.03■■□□□ 1.6
SF3B2-207ENST00000529577 RIOK1Q9BRS2 568 aaKnown RBP25.03■■□□□ 1.6
SF3B2-207ENST00000529577 GUCY1A2P33402 732 aa25.02■■□□□ 1.6
SF3B2-207ENST00000529577 FTSJ3Q8IY81 847 aaKnown RBP25.02■■□□□ 1.6
SF3B2-207ENST00000529577 CRACR2BQ8N4Y2 399 aaPredicted RBP25.02■■□□□ 1.6
SF3B2-207ENST00000529577 C19orf81C9J6K1 198 aa25.01■■□□□ 1.59
SF3B2-207ENST00000529577 SOX1O00570 391 aaPredicted RBP25.01■■□□□ 1.59
SF3B2-207ENST00000529577 CYP2B6P20813 491 aa25.01■■□□□ 1.59
SF3B2-207ENST00000529577 PLCD1P51178 756 aa25.01■■□□□ 1.59
SF3B2-207ENST00000529577 SIRT2Q8IXJ6 389 aa25.01■■□□□ 1.59
SF3B2-207ENST00000529577 ACER1Q8TDN7 264 aa25.01■■□□□ 1.59
SF3B2-207ENST00000529577 NAV1Q8NEY1 1877 aa25■■□□□ 1.59
SF3B2-207ENST00000529577 IRX3P78415 501 aaPredicted RBP25■■□□□ 1.59
SF3B2-207ENST00000529577 CCL14Q16627 93 aa25■■□□□ 1.59
SF3B2-207ENST00000529577 IL1RAPL2Q9NP60 686 aa25■■□□□ 1.59
SF3B2-207ENST00000529577 TMOD4Q9NZQ9 345 aa25■■□□□ 1.59
SF3B2-207ENST00000529577 IGSF3O75054 1194 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 SHMT1P34896 483 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 AACSQ86V21 672 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 RPTORQ8N122 1335 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 C12orf42Q96LP6 360 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 GINM1Q9NU53 330 aa24.99■■□□□ 1.59
SF3B2-207ENST00000529577 ERVK-9P63128 1117 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 ERVK-24P63145 666 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 ZYXQ15942 572 aaKnown RBP24.98■■□□□ 1.59
SF3B2-207ENST00000529577 SLFNL1Q499Z3 407 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 MORN1Q5T089 497 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 GPRC5AQ8NFJ5 357 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 STAP2Q9UGK3 403 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 RLFQ13129 1914 aa24.98■■□□□ 1.59
SF3B2-207ENST00000529577 COL6A3P12111 3177 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 GABPAQ06546 454 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 USP17L2Q6R6M4 530 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 EDC3Q96F86 508 aaKnown RBP24.97■■□□□ 1.59
SF3B2-207ENST00000529577 EHD4Q9H223 541 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 OGDHLQ9ULD0 1010 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 FRMPD3Q5JV73 1810 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 DNAH12Q6ZR08 3092 aa24.97■■□□□ 1.59
SF3B2-207ENST00000529577 PFASO15067 1338 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 TCRBV5S4A2TA0A5A2 114 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 SMIM22K7EJ46 135 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 EVI5O60447 810 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 CHGBP05060 677 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 HLA-DOAP06340 250 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 CACNB2Q08289 660 aaPredicted RBP24.96■■□□□ 1.59
SF3B2-207ENST00000529577 GPR142Q7Z601 462 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 RHPN1Q8TCX5 695 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 PAGR1Q9BTK6 254 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 HMX1Q9NP08 348 aaPredicted RBP24.96■■□□□ 1.59
SF3B2-207ENST00000529577 SERPINB13Q9UIV8 391 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 NR2E3Q9Y5X4 410 aa24.96■■□□□ 1.59
SF3B2-207ENST00000529577 PRKAR2AP13861 404 aaKnown RBP24.95■■□□□ 1.58
SF3B2-207ENST00000529577 CCND3P30281 292 aaPredicted RBP24.95■■□□□ 1.58
SF3B2-207ENST00000529577 USP5P45974 858 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms