RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 SECISBP2LQ93073 1101 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 IFT74Q96LB3 600 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 TTF2Q9UNY4 1162 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 MROH5Q6ZUA9 1318 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 NEURL1BA8MQ27 555 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 E7EVH7 732 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 ELF2Q15723 593 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 HERC4Q5GLZ8 1057 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 WDR66Q8TBY9 1149 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 RNF34Q969K3 372 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 ERO1AQ96HE7 468 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 DDX23Q9BUQ8 820 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 OGFRQ9NZT2 677 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 SORBS3O60504 671 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 NBPF14Q5TI25 921 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 KLHL7Q8IXQ5 586 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 RRAGDQ9NQL2 400 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 NFE2L3Q9Y4A8 694 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 CETN3O15182 167 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 CFBP00751 764 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 PPP1R2P41236 205 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 TFAP4Q01664 338 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 PTH1RQ03431 593 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 PPARAQ07869 468 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 INF2Q27J81 1249 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 MRPL44Q9H9J2 332 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 UTP11Q9Y3A2 253 aaKnown RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 HOXB7P09629 217 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 ERCC5P28715 1186 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-220ENST00000529526 KRBA2Q6ZNG9 492 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 NOX5Q96PH1 765 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 LMBRD1Q9NUN5 540 aa9.06□□□□□ -0.96
CTNND1-220ENST00000529526 HGSO14964 777 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 GSPT1P15170 499 aaKnown RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 KRT25Q7Z3Z0 450 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 SPATA24Q86W54 205 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 SLF1Q9BQI6 1058 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 NOP56O00567 594 aaKnown RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 TUBB4BP68371 445 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 SF3A3Q12874 501 aaKnown RBP eCLIP9.05□□□□□ -0.962e-7■■■□□ 14.9
CTNND1-220ENST00000529526 MLKLQ8NB16 471 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 AFAP1L1Q8TED9 768 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 TBX22Q9Y458 520 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 UNC13AQ9UPW8 1703 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 LRMPQ12912 555 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 PPANQ9NQ55 473 aaKnown RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 DNM3Q9UQ16 869 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 LIN9Q5TKA1 542 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 LARGE2Q8N3Y3 721 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 FAM204AQ9H8W3 233 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 CTTNBP2NLQ9P2B4 639 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 MYO1AQ9UBC5 1043 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 ODF2LQ9ULJ1 636 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 ARHGEF10O15013 1369 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 ADKP55263 362 aaKnown RBP9.05□□□□□ -0.96
CTNND1-220ENST00000529526 CTSWP56202 376 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 CCDC14Q49A88 953 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 RDH13Q8NBN7 331 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 NKIRAS1Q9NYS0 192 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 EXOC7Q9UPT5 735 aa9.05□□□□□ -0.96
CTNND1-220ENST00000529526 IBTKQ9P2D0 1353 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 CEP104O60308 925 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 NSMFQ6X4W1 530 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 UBL4BQ8N7F7 174 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 MAST3O60307 1309 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 H0YIN7 160 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 KRT19P08727 400 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 TTC31Q49AM3 519 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 GPR161Q8N6U8 529 aaKnown RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 SDR42E1Q8WUS8 393 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 EXOC3O60645 756 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 ARHGAP44Q17R89 818 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 SLC9C1Q4G0N8 1177 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 TPH2Q8IWU9 490 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 NAP1L3Q99457 506 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 FAM207AQ9NSI2 230 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 DAPK3O43293 454 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 INTS8Q75QN2 995 aaKnown RBP9.04□□□□□ -0.96
CTNND1-220ENST00000529526 FMNL3Q8IVF7 1028 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 ARFGAP2Q8N6H7 521 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 NUP58Q9BVL2 599 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms