RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 Q7L0L9 218 aa16.59■□□□□ 0.25
HIF3A-212ENST00000529205 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-212ENST00000529205 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
HIF3A-212ENST00000529205 HLA-DOAP06340 250 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 ERVK-9P63128 1117 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 ERVK-24P63145 666 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 CACNB2Q08289 660 aaPredicted RBP16.58■□□□□ 0.24
HIF3A-212ENST00000529205 MTX1Q13505 466 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.24
HIF3A-212ENST00000529205 PI16Q6UXB8 463 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 PLEKHH3Q7Z736 793 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 TGFBRAP1Q8WUH2 860 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 LBHD1Q9BQE6 289 aaPredicted RBP16.58■□□□□ 0.24
HIF3A-212ENST00000529205 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.24
HIF3A-212ENST00000529205 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
HIF3A-212ENST00000529205 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
HIF3A-212ENST00000529205 PFASO15067 1338 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 CCNA1P78396 465 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 CCDC158Q5M9N0 1113 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 GPR142Q7Z601 462 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 APBA2Q99767 749 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 TXNRD2Q9NNW7 524 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 ALPK3Q96L96 1907 aa16.57■□□□□ 0.24
HIF3A-212ENST00000529205 IGSF3O75054 1194 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 COL6A1P12109 1028 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 MCAMP43121 646 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 MFSD14CQ5VZR4 134 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
HIF3A-212ENST00000529205 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 ATAD5Q96QE3 1844 aa16.56■□□□□ 0.24
HIF3A-212ENST00000529205 DOCK3Q8IZD9 2030 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 MSCO60682 206 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 GDF11O95390 407 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 GNAI2P04899 355 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 CCND3P30281 292 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-212ENST00000529205 PPP4CP60510 307 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 MDM2Q00987 491 aaPredicted RBP16.55■□□□□ 0.24
HIF3A-212ENST00000529205 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 Q3C1V9 767 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
HIF3A-212ENST00000529205 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
HIF3A-212ENST00000529205 FLT1P17948 1338 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
HIF3A-212ENST00000529205 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 MORN1Q5T089 497 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 WDR78Q5VTH9 848 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 LHX8Q68G74 356 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 METTL16Q86W50 562 aaKnown RBP16.54■□□□□ 0.24
HIF3A-212ENST00000529205 USP6NLQ92738 828 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 FEZ1Q99689 392 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 PORCNQ9H237 461 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 PEX10O60683 326 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 CNGA1P29973 690 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP14P54578 494 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 ATP2B2Q01814 1243 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 CCL14Q16627 93 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-212ENST00000529205 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 TRMT2AQ8IZ69 625 aaKnown RBP16.53■□□□□ 0.24
HIF3A-212ENST00000529205 SENP6Q9GZR1 1112 aaPredicted RBP16.53■□□□□ 0.24
HIF3A-212ENST00000529205 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
HIF3A-212ENST00000529205 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-212ENST00000529205 GPR108Q9NPR9 543 aa16.52■□□□□ 0.24
HIF3A-212ENST00000529205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
HIF3A-212ENST00000529205 PLXNB2O15031 1838 aa16.52■□□□□ 0.23
HIF3A-212ENST00000529205 SLC15A5A6NIM6 579 aa16.51■□□□□ 0.23
HIF3A-212ENST00000529205 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
HIF3A-212ENST00000529205 JAG1P78504 1218 aa16.51■□□□□ 0.23
HIF3A-212ENST00000529205 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
HIF3A-212ENST00000529205 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
HIF3A-212ENST00000529205 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
HIF3A-212ENST00000529205 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
HIF3A-212ENST00000529205 SAP30BPQ9UHR5 308 aaKnown RBP16.51■□□□□ 0.23
HIF3A-212ENST00000529205 GH2P01242 217 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 PTPREP23469 700 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 USP5P45974 858 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 ZNF697Q5TEC3 545 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 LPAR1Q92633 364 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
HIF3A-212ENST00000529205 PNMA6EA0A0J9YXQ4 647 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms