RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 MGAMO43451 1857 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 FMNL1O95466 1100 aaPredicted RBP16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 FCGRTP55899 365 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 TATDN1Q6P1N9 297 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 ZNF333Q96JL9 665 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 TRIM47Q96LD4 638 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 HAUS7Q99871 368 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 SAP30BPQ9UHR5 308 aaKnown RBP16.32■□□□□ 0.2
SNRNP35-205ENST00000529201 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 OSBPP22059 807 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 HMGCS2P54868 508 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 BACE1P56817 501 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.31■□□□□ 0.2
SNRNP35-205ENST00000529201 TCRBV5S4A2TA0A5A2 114 aa16.3■□□□□ 0.2
SNRNP35-205ENST00000529201 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
SNRNP35-205ENST00000529201 BOLA2Q9H3K6 86 aa16.3■□□□□ 0.2
SNRNP35-205ENST00000529201 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
SNRNP35-205ENST00000529201 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
SNRNP35-205ENST00000529201 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 CTGFP29279 349 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 ADD2P35612 726 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 TREML2Q5T2D2 321 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 MYH7P12883 1935 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
SNRNP35-205ENST00000529201 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 GDF11O95390 407 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 MTMR2Q13614 643 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 CERKLQ49MI3 558 aaPredicted RBP16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 CABP5Q9NP86 173 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
SNRNP35-205ENST00000529201 GRK4P32298 578 aa16.27■□□□□ 0.2
SNRNP35-205ENST00000529201 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.2
SNRNP35-205ENST00000529201 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
SNRNP35-205ENST00000529201 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.2
SNRNP35-205ENST00000529201 MCM9Q9NXL9 1143 aa16.27■□□□□ 0.2
SNRNP35-205ENST00000529201 POTEFA5A3E0 1075 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 GH2P01242 217 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 PLCD1P51178 756 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 USP14P54578 494 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 JAG1P78504 1218 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 GABPAQ06546 454 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 IRF5Q13568 498 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 SLC4A8Q2Y0W8 1093 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 COA7Q96BR5 231 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 EDC3Q96F86 508 aaKnown RBP16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
SNRNP35-205ENST00000529201 CAPN2P17655 700 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 UBXN2AP68543 259 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 PRKCZQ05513 592 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 PXYLP1Q8TE99 480 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 SH3TC2Q8TF17 1288 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 HTTP42858 3142 aa16.25■□□□□ 0.19
SNRNP35-205ENST00000529201 MBD4O95243 580 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 SHMT1P34896 483 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 AAMPQ13685 434 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 ARMT1Q9H993 441 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 KIAA0100Q14667 2235 aaKnown RBP16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
SNRNP35-205ENST00000529201 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 ERC2O15083 957 aa16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 FEZ1Q99689 392 aa16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
SNRNP35-205ENST00000529201 MYH8P13535 1937 aa16.22■□□□□ 0.19
SNRNP35-205ENST00000529201 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms