RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FBXL18Q96ME1 805 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 GGT7Q9UJ14 662 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 TARBP1Q13395 1621 aaKnown RBP7.74□□□□□ -1.17
CSDE1-212ENST00000529046 PRAMEF27A3QJZ7 478 aa7.73□□□□□ -1.17
CSDE1-212ENST00000529046 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-212ENST00000529046 LRFN4Q6PJG9 635 aa7.73□□□□□ -1.17
CSDE1-212ENST00000529046 CDC37L1Q7L3B6 337 aa7.73□□□□□ -1.17
CSDE1-212ENST00000529046 FLCNQ8NFG4 579 aa7.73□□□□□ -1.17
CSDE1-212ENST00000529046 WDR97A6NE52 1622 aa7.73□□□□□ -1.17
CSDE1-212ENST00000529046 POLA1P09884 1462 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-212ENST00000529046 GREM1O60565 184 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 RACK1P63244 317 aaKnown RBP7.72□□□□□ -1.17
CSDE1-212ENST00000529046 INPP5AQ14642 412 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 ARHGAP27Q6ZUM4 889 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 HDXQ7Z353 690 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 UBE3DQ7Z6J8 389 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 NT5DC4Q86YG4 428 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 TP53INP2Q8IXH6 220 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 FAM181AQ8N9Y4 354 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 KCT2Q8NC54 265 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 PLPPR2Q96GM1 343 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 TLR6Q9Y2C9 796 aa7.72□□□□□ -1.17
CSDE1-212ENST00000529046 SOGA1O94964 1423 aa7.71□□□□□ -1.17
CSDE1-212ENST00000529046 AQRO60306 1485 aaKnown RBP eCLIP7.71□□□□□ -1.183e-7■■□□□ 12.7
CSDE1-212ENST00000529046 COL17A1Q9UMD9 1497 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-212ENST00000529046 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-212ENST00000529046 MAP3K11Q16584 847 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 WIPI1Q5MNZ9 446 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-212ENST00000529046 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-212ENST00000529046 NFXL1Q6ZNB6 911 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 RELL1Q8IUW5 271 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 ZNF507Q8TCN5 953 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 NETO1Q8TDF5 533 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 TGIF2Q9GZN2 237 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 PCDHB5Q9Y5E4 795 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 SNCAIPQ9Y6H5 919 aa7.71□□□□□ -1.18
CSDE1-212ENST00000529046 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.18
CSDE1-212ENST00000529046 ARHGEF11O15085 1522 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 FAM221AA4D161 298 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 CYFIP1Q7L576 1253 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 STK11IPQ8N1F8 1099 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 PLD6Q8N2A8 252 aaKnown RBP7.7□□□□□ -1.18
CSDE1-212ENST00000529046 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 LRRC3Q9BY71 257 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 MKNK2Q9HBH9 465 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 SLC5A6Q9Y289 635 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
CSDE1-212ENST00000529046 PF4P02776 101 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 SEPT6Q14141 434 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 ARMCX6Q7L4S7 300 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 USP48Q86UV5 1035 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-212ENST00000529046 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 PAK6Q9NQU5 681 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-212ENST00000529046 ADAMTS1Q9UHI8 967 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 ADGRE2Q9UHX3 823 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 U3KQE9 123 aa7.69□□□□□ -1.18
CSDE1-212ENST00000529046 CILPO75339 1184 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 LRIG2O94898 1065 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 CEACAM5P06731 702 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 TAL1P17542 331 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-212ENST00000529046 GBP2P32456 591 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-212ENST00000529046 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
CSDE1-212ENST00000529046 CDK8P49336 464 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 OXCT1P55809 520 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 ETF1P62495 437 aaKnown RBP7.68□□□□□ -1.18
CSDE1-212ENST00000529046 IFI16Q16666 785 aaKnown RBP7.68□□□□□ -1.18
CSDE1-212ENST00000529046 FBXL19Q6PCT2 694 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 ZNF654Q8IZM8 581 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 WNT10AQ9GZT5 417 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 MIR1-1HGQ9H1L0 117 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 GTF2IRD1Q9UHL9 959 aa7.68□□□□□ -1.18
CSDE1-212ENST00000529046 GFRA2O00451 464 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 ITIH2P19823 946 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 ZNF574Q6ZN55 896 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-212ENST00000529046 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 GATAD2BQ8WXI9 593 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 FBRSQ9HAH7 460 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 TACC3Q9Y6A5 838 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
CSDE1-212ENST00000529046 F6X3S4 739 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 GJA8P48165 433 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 RASGRP4Q8TDF6 673 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 ZNF296Q8WUU4 475 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-212ENST00000529046 HEXIM2Q96MH2 286 aaKnown RBP7.66□□□□□ -1.18
CSDE1-212ENST00000529046 NT5C1AQ9BXI3 368 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-212ENST00000529046 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 TDRD9Q8NDG6 1382 aaKnown RBP7.66□□□□□ -1.18
CSDE1-212ENST00000529046 MAGI1Q96QZ7 1491 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-212ENST00000529046 RAD54L2Q9Y4B4 1467 aa7.66□□□□□ -1.18
CSDE1-212ENST00000529046 TMEM265A0A087WTH1 108 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms