RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 PA2G4Q9UQ80 394 aaKnown RBP22.05■■□□□ 1.12
LTBP3-211ENST00000528966 RLFQ13129 1914 aa22.04■■□□□ 1.12
LTBP3-211ENST00000528966 ATN1P54259 1190 aaPredicted RBP22.04■■□□□ 1.12
LTBP3-211ENST00000528966 TIMM10P62072 90 aa22.04■■□□□ 1.12
LTBP3-211ENST00000528966 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
LTBP3-211ENST00000528966 MRS2Q9HD23 443 aa22.04■■□□□ 1.12
LTBP3-211ENST00000528966 HERC5Q9UII4 1024 aaKnown RBP22.04■■□□□ 1.12
LTBP3-211ENST00000528966 SHHQ15465 462 aa22.03■■□□□ 1.12
LTBP3-211ENST00000528966 SHROOM1Q2M3G4 852 aaPredicted RBP22.03■■□□□ 1.12
LTBP3-211ENST00000528966 C9orf50Q5SZB4 431 aa22.03■■□□□ 1.12
LTBP3-211ENST00000528966 PLEKHH3Q7Z736 793 aa22.03■■□□□ 1.12
LTBP3-211ENST00000528966 MYLIPQ8WY64 445 aa22.03■■□□□ 1.12
LTBP3-211ENST00000528966 TTYH1Q9H313 450 aaPredicted RBP22.03■■□□□ 1.12
LTBP3-211ENST00000528966 FLRT1Q9NZU1 646 aa22.03■■□□□ 1.12
LTBP3-211ENST00000528966 MAP4K4O95819 1239 aaPredicted RBP22.02■■□□□ 1.12
LTBP3-211ENST00000528966 NSUN4Q96CB9 384 aaKnown RBP22.02■■□□□ 1.12
LTBP3-211ENST00000528966 PAGR1Q9BTK6 254 aa22.02■■□□□ 1.12
LTBP3-211ENST00000528966 CDK5RAP2Q96SN8 1893 aa22.01■■□□□ 1.11
LTBP3-211ENST00000528966 ASNSP08243 561 aa22.01■■□□□ 1.11
LTBP3-211ENST00000528966 RTP1P59025 263 aa22.01■■□□□ 1.11
LTBP3-211ENST00000528966 MAP2K5Q13163 448 aa22.01■■□□□ 1.11
LTBP3-211ENST00000528966 CCAR1Q8IX12 1150 aaKnown RBP22.01■■□□□ 1.11
LTBP3-211ENST00000528966 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
LTBP3-211ENST00000528966 C19orf81C9J6K1 198 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 PI16Q6UXB8 463 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 SSH1Q8WYL5 1049 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 XAGE2Q96GT9 111 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 PI4KBQ9UBF8 816 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 PRKAG2Q9UGJ0 569 aa22■■□□□ 1.11
LTBP3-211ENST00000528966 DDX20Q9UHI6 824 aaKnown RBP22■■□□□ 1.11
LTBP3-211ENST00000528966 A0A1B0GUL7 405 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 USP17L10C9JJH3 530 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 DNM1LO00429 736 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 UBTFL1P0CB47 393 aaPredicted RBP21.99■■□□□ 1.11
LTBP3-211ENST00000528966 TBC1D9Q6ZT07 1266 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 TEX11Q8IYF3 940 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 LPAR1Q92633 364 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 COPRSQ9NQ92 184 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 HMG20BQ9P0W2 317 aa21.99■■□□□ 1.11
LTBP3-211ENST00000528966 LDHCP07864 332 aa21.98■■□□□ 1.11
LTBP3-211ENST00000528966 GSTO1P78417 241 aa21.98■■□□□ 1.11
LTBP3-211ENST00000528966 MFSD14CQ5VZR4 134 aa21.98■■□□□ 1.11
LTBP3-211ENST00000528966 SH3RF3Q8TEJ3 882 aaPredicted RBP21.98■■□□□ 1.11
LTBP3-211ENST00000528966 GTF3C2Q8WUA4 911 aaPredicted RBP21.98■■□□□ 1.11
LTBP3-211ENST00000528966 EDC3Q96F86 508 aaKnown RBP21.98■■□□□ 1.11
LTBP3-211ENST00000528966 EMILIN3Q9NT22 766 aa21.98■■□□□ 1.11
LTBP3-211ENST00000528966 NDUFB9Q9Y6M9 179 aa21.98■■□□□ 1.11
LTBP3-211ENST00000528966 FOCADQ5VW36 1801 aa21.97■■□□□ 1.11
LTBP3-211ENST00000528966 CNMDO75829 334 aa21.97■■□□□ 1.11
LTBP3-211ENST00000528966 SMAD3P84022 425 aaKnown RBP21.97■■□□□ 1.11
LTBP3-211ENST00000528966 ATP11BQ9Y2G3 1177 aa21.97■■□□□ 1.11
LTBP3-211ENST00000528966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.97■■□□□ 1.11
LTBP3-211ENST00000528966 NCOR1O75376 2440 aa21.97■■□□□ 1.11
LTBP3-211ENST00000528966 MSCO60682 206 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 GDF11O95390 407 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 FOSL2P15408 326 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 CNGA1P29973 690 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 MVPQ14764 893 aaKnown RBP21.96■■□□□ 1.11
LTBP3-211ENST00000528966 METTL16Q86W50 562 aaKnown RBP21.96■■□□□ 1.11
LTBP3-211ENST00000528966 TRPV1Q8NER1 839 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 SYMPKQ92797 1274 aaKnown RBP21.96■■□□□ 1.11
LTBP3-211ENST00000528966 DHX36Q9H2U1 1008 aaKnown RBP21.96■■□□□ 1.11
LTBP3-211ENST00000528966 ZBTB21Q9ULJ3 1066 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
LTBP3-211ENST00000528966 COL9A1P20849 921 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 CYP2C19P33261 490 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 SPATA5Q8NB90 893 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 BADQ92934 168 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 CWC22Q9HCG8 908 aaKnown RBP21.95■■□□□ 1.1
LTBP3-211ENST00000528966 RAI14Q9P0K7 980 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 RABGAP1Q9Y3P9 1069 aa21.95■■□□□ 1.1
LTBP3-211ENST00000528966 IGHA2P01877 340 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 HOXC6P09630 235 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 PTPREP23469 700 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 TFCP2Q12800 502 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 GJC2Q5T442 439 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-211ENST00000528966 SLC39A5Q6ZMH5 540 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 NPLOC4Q8TAT6 608 aa21.94■■□□□ 1.1
LTBP3-211ENST00000528966 PRDM5Q9NQX1 630 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-211ENST00000528966 SLC15A5A6NIM6 579 aa21.93■■□□□ 1.1
LTBP3-211ENST00000528966 GLRX3O76003 335 aaKnown RBP21.93■■□□□ 1.1
LTBP3-211ENST00000528966 GINM1Q9NU53 330 aa21.93■■□□□ 1.1
LTBP3-211ENST00000528966 BDP1A6H8Y1 2624 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 CYBAP13498 195 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 CCNA1P78396 465 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 ATP2B2Q01814 1243 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 GRB14Q14449 540 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 WDR78Q5VTH9 848 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 USP17L2Q6R6M4 530 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 FOXP4Q8IVH2 680 aaPredicted RBP21.92■■□□□ 1.1
LTBP3-211ENST00000528966 MAPKAPK5Q8IW41 473 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 USP38Q8NB14 1042 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 PDLIM7Q9NR12 457 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 AKAP2Q9Y2D5 859 aa21.92■■□□□ 1.1
LTBP3-211ENST00000528966 FLT1P17948 1338 aa21.91■■□□□ 1.1
LTBP3-211ENST00000528966 SNX17Q15036 470 aa21.91■■□□□ 1.1
LTBP3-211ENST00000528966 TRIM60Q495X7 471 aa21.91■■□□□ 1.1
LTBP3-211ENST00000528966 SH3RF1Q7Z6J0 888 aa21.91■■□□□ 1.1
LTBP3-211ENST00000528966 CRACR2BQ8N4Y2 399 aaPredicted RBP21.91■■□□□ 1.1
LTBP3-211ENST00000528966 TGFBRAP1Q8WUH2 860 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms