RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 CD99L2Q8TCZ2 262 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 WNK4Q96J92 1243 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
USF1-208ENST00000528768 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 LAMB1P07942 1786 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 CENPFP49454 3210 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
USF1-208ENST00000528768 FGAP02671 866 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 APPP05067 770 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 DNM1Q05193 864 aaKnown RBP13.73□□□□□ -0.21
USF1-208ENST00000528768 ALX1Q15699 326 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 DACT2Q5SW24 774 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
USF1-208ENST00000528768 RGS22Q8NE09 1264 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 ZNF396Q96N95 335 aaPredicted RBP13.73□□□□□ -0.21
USF1-208ENST00000528768 PPP1R9BQ96SB3 815 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
USF1-208ENST00000528768 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 H0YGN5 161 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 PDE6AP16499 860 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 PHKA1P46020 1223 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 EVCP57679 992 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 SCRN1Q12765 414 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 CRHR2Q13324 411 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 PRKG1Q13976 671 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 COA1Q9GZY4 146 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 SEC31BQ9NQW1 1179 aa13.72□□□□□ -0.21
USF1-208ENST00000528768 SCAF8Q9UPN6 1271 aaKnown RBP13.72□□□□□ -0.21
USF1-208ENST00000528768 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
USF1-208ENST00000528768 TESPA1A2RU30 521 aaPredicted RBP13.71□□□□□ -0.21
USF1-208ENST00000528768 PRC1O43663 620 aa13.71□□□□□ -0.21
USF1-208ENST00000528768 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.21
USF1-208ENST00000528768 CHGBP05060 677 aa13.71□□□□□ -0.21
USF1-208ENST00000528768 CAVIN4Q5BKX8 364 aa13.71□□□□□ -0.21
USF1-208ENST00000528768 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
USF1-208ENST00000528768 PUS7LQ9H0K6 701 aaKnown RBP13.71□□□□□ -0.21
USF1-208ENST00000528768 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
USF1-208ENST00000528768 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 COL4A1P02462 1669 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 PATL2C9JE40 543 aaKnown RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 CPLX1O14810 134 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 CDKL5O76039 1030 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 CHRNDQ07001 517 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 HS1BP3Q53T59 392 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 TMED8Q6PL24 325 aaPredicted RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 ZBED3Q96IU2 234 aaPredicted RBP13.7□□□□□ -0.22
USF1-208ENST00000528768 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 TMEM87BQ96K49 555 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 RBSNQ9H1K0 784 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 DEFB129Q9H1M3 183 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 MYH7P12883 1935 aa13.7□□□□□ -0.22
USF1-208ENST00000528768 A0A1W2PPC1 479 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 GNRH1P01148 92 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
USF1-208ENST00000528768 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
USF1-208ENST00000528768 KRT23Q9C075 422 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 ANKRD2Q9GZV1 360 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 NAPBQ9H115 298 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
USF1-208ENST00000528768 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
USF1-208ENST00000528768 BRCA2P51587 3418 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 SZT2Q5T011 3432 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 SEMA3EO15041 775 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 MYO1BO43795 1136 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 JAK2O60674 1132 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 IGSF3O75054 1194 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
USF1-208ENST00000528768 PRMT2P55345 433 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 HAND2P61296 217 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 RESTQ13127 1097 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 PI16Q6UXB8 463 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 VPS37DQ86XT2 251 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 ANKRD13AQ8IZ07 590 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
USF1-208ENST00000528768 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms