RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PLAGL2Q9UPG8 496 aa4.92□□□□□ -1.62
BRCA2-203ENST00000528762 CARMIL2Q6F5E8 1435 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 SMARCA5O60264 1052 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-203ENST00000528762 FGRP09769 529 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 ARNTP27540 789 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 GBP2P32456 591 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-203ENST00000528762 GJA8P48165 433 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 FZD5Q13467 585 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 CCDC85BQ15834 202 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-203ENST00000528762 RASIP1Q5U651 963 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 SV2BQ7L1I2 683 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 C12orf40Q86WS4 652 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 C3orf58Q8NDZ4 430 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 ANKRD24Q8TF21 1146 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 SPON2Q9BUD6 331 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 PICK1Q9NRD5 415 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 KRT82Q9NSB4 513 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 MBNL3Q9NUK0 354 aaKnown RBP4.91□□□□□ -1.62
BRCA2-203ENST00000528762 KBTBD4Q9NVX7 518 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 PCOLCE2Q9UKZ9 415 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 PPM1HQ9ULR3 514 aa4.91□□□□□ -1.62
BRCA2-203ENST00000528762 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-203ENST00000528762 CEACAM5P06731 702 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 HSP90B1P14625 803 aaKnown RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 JUNBP17275 347 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 FUT4P22083 530 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 CANXP27824 592 aaKnown RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 EIF4A3P38919 411 aaKnown RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 OXCT1P55809 520 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 ZC3H12AQ5D1E8 599 aaKnown RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 STK11IPQ8N1F8 1099 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 LRRN4CLQ8ND94 238 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 GPRASP2Q96D09 838 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 HEXIM2Q96MH2 286 aaKnown RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 TMEM74Q96NL1 305 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 HIRIP3Q9BW71 556 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-203ENST00000528762 LNPKQ9C0E8 428 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 CEP44Q9C0F1 390 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 SYNGAP1Q96PV0 1343 aa4.9□□□□□ -1.63
BRCA2-203ENST00000528762 STK10O94804 968 aaKnown RBP4.89□□□□□ -1.63
BRCA2-203ENST00000528762 NME2P22392 152 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 JAG1P78504 1218 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 NOP9Q86U38 636 aaKnown RBP4.89□□□□□ -1.63
BRCA2-203ENST00000528762 MCF2L2Q86YR7 1114 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 KIAA0825Q8IV33 1275 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 PI4K2BQ8TCG2 481 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 ZNF296Q8WUU4 475 aaPredicted RBP4.89□□□□□ -1.63
BRCA2-203ENST00000528762 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 HRASLS5Q96KN8 279 aa4.89□□□□□ -1.63
BRCA2-203ENST00000528762 ENC1O14682 589 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 CELA3AP09093 270 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 HMGB1P09429 215 aaKnown RBP4.88□□□□□ -1.63
BRCA2-203ENST00000528762 ZNF252P-AS1Q0IIN9 211 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 MAP3K11Q16584 847 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 IFI16Q16666 785 aaKnown RBP4.88□□□□□ -1.63
BRCA2-203ENST00000528762 POU5F2Q8N7G0 328 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 RNF214Q8ND24 703 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 PMFBP1Q8TBY8 1022 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 RASGRP4Q8TDF6 673 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 FAM168AQ92567 244 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 NECAB3Q96P71 396 aaPredicted RBP4.88□□□□□ -1.63
BRCA2-203ENST00000528762 ADAMTS1Q9UHI8 967 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 PCDHA4Q9UN74 947 aa4.88□□□□□ -1.63
BRCA2-203ENST00000528762 F6X3S4 739 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 SSBP05455 408 aaKnown RBP eCLIP4.87□□□□□ -1.63
BRCA2-203ENST00000528762 BMP6P22004 513 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 NTF4P34130 210 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 ERVK-24P63145 666 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 PRKCQQ04759 706 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 IKZF1Q13422 519 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 CCDC144BQ3MJ40 725 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 EAF1Q96JC9 268 aaPredicted RBP4.87□□□□□ -1.63
BRCA2-203ENST00000528762 NT5C1AQ9BXI3 368 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 VAV3Q9UKW4 847 aa4.87□□□□□ -1.63
BRCA2-203ENST00000528762 PRAMEF27A3QJZ7 478 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 GREM1O60565 184 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 PF4P02776 101 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 NASPP49321 788 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-203ENST00000528762 CDK8P49336 464 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 LIG3P49916 1009 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 PTPN11Q06124 597 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-203ENST00000528762 CAMK2GQ13555 558 aaPredicted RBP4.86□□□□□ -1.63
BRCA2-203ENST00000528762 FBXL19Q6PCT2 694 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 FAM214BQ7L5A3 538 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 PHC3Q8NDX5 983 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 EMILIN2Q9BXX0 1053 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 PIF1Q9H611 641 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 PRDM10Q9NQV6 1147 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 TLR6Q9Y2C9 796 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 TBX22Q9Y458 520 aa4.86□□□□□ -1.63
BRCA2-203ENST00000528762 SUPT16HQ9Y5B9 1047 aaKnown RBP4.86□□□□□ -1.63
BRCA2-203ENST00000528762 TMEM265A0A087WTH1 108 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 PRR33A8MZF0 331 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 BIN1O00499 593 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 LMNB1P20700 586 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 HNRNPUQ00839 825 aaKnown RBP eCLIP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms