RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 KCNQ2O43526 872 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 KCNJ6P48051 423 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 CAVIN4Q5BKX8 364 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 ZNF215Q9UL58 517 aaPredicted RBP12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 CEP131Q9UPN4 1083 aa12.05□□□□□ -0.48
AP002008.3-201ENST00000528614 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PHLPP1O60346 1717 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PKN1Q16512 942 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PDILTQ8N807 584 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 hCG_1642624A0A1W2PR95 340 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 MYO1BO43795 1136 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PRDM1O75626 825 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 SARSP49591 514 aaKnown RBP12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 VSTM4Q8IW00 320 aa12.04□□□□□ -0.48
AP002008.3-201ENST00000528614 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 TOP1P11387 765 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 XBP1P17861 261 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 HSP90AA4PQ58FG1 418 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 NT5DC1Q5TFE4 455 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 ZNF384Q8TF68 577 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 PLEKHA8P1O95397 391 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 GOLGA8DPQ0D2H9 430 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 FUT2Q10981 343 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 MORC3Q14149 939 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 EARS2Q5JPH6 523 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 CTR9Q6PD62 1173 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 SYT10Q6XYQ8 523 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 V9GYY5 206 aaPredicted RBP12.03□□□□□ -0.48
AP002008.3-201ENST00000528614 KRT2P35908 639 aa12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 MLKLQ8NB16 471 aa12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 PHF20Q9BVI0 1012 aa12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 TMX1Q9H3N1 280 aa12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 INTS13Q9NVM9 706 aa12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.48
AP002008.3-201ENST00000528614 RREB1Q92766 1687 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 USP17L21D6R901 530 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 SLU7O95391 586 aaKnown RBP12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 CDK11BP21127 795 aaKnown RBP12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 KCNQ4P56696 695 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 KANK3Q6NY19 840 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 IQCA1Q86XH1 822 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 ERO1AQ96HE7 468 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
AP002008.3-201ENST00000528614 COL22A1Q8NFW1 1626 aaPredicted RBP12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 FGRP09769 529 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 EVX2Q03828 476 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 ENOX1Q8TC92 643 aaKnown RBP12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 TROAPQ12815 778 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 TRIML1Q8N9V2 468 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 DHX58Q96C10 678 aa12.01□□□□□ -0.49
AP002008.3-201ENST00000528614 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms