RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ASNSP08243 561 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 ATP5JP18859 108 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 OSBPP22059 807 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 CAP2P40123 477 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 SPP2Q13103 211 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 RAB3GAP1Q15042 981 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 TSHZ3Q63HK5 1081 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 TMED8Q6PL24 325 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 FOXP4Q8IVH2 680 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 ZCCHC17Q9NP64 241 aaKnown RBP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 KCNH4Q9UQ05 1017 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 FOCADQ5VW36 1801 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 LAMB1P07942 1786 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 MYH7P12883 1935 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 CYP2C8P10632 490 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 HMGCS2P54868 508 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-210ENST00000528441 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-210ENST00000528441 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
CMTM1-210ENST00000528441 ANKRD45Q5TZF3 282 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 CCAR1Q8IX12 1150 aaKnown RBP10.94□□□□□ -0.66
CMTM1-210ENST00000528441 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 HAUS7Q99871 368 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-210ENST00000528441 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
CMTM1-210ENST00000528441 A0A0G2JLL6 359 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-210ENST00000528441 HOXD10P28358 340 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 ADD2P35612 726 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 MTMR2Q13614 643 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 CERKLQ49MI3 558 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-210ENST00000528441 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 PRRT2Q7Z6L0 340 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-210ENST00000528441 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 AFG3L2Q9Y4W6 797 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
CMTM1-210ENST00000528441 RAD21O60216 631 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 GH2P01242 217 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 APPP05067 770 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 PSMC4P43686 418 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 FCGRTP55899 365 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 ZBTB21Q9ULJ3 1066 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 PTPN22Q9Y2R2 807 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 MYH8P13535 1937 aa10.92□□□□□ -0.66
CMTM1-210ENST00000528441 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-210ENST00000528441 LACTBP83111 547 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-210ENST00000528441 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
CMTM1-210ENST00000528441 ARHGAP39Q9C0H5 1083 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-210ENST00000528441 PTCH2Q9Y6C5 1203 aa10.91□□□□□ -0.66
CMTM1-210ENST00000528441 TTC41PQ6P2S7 1318 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 PTPRFP10586 1907 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
CMTM1-210ENST00000528441 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
CMTM1-210ENST00000528441 MX1P20591 662 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 TDO2P48775 406 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 MAP3K10Q02779 954 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 TREML2Q5T2D2 321 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
CMTM1-210ENST00000528441 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
CMTM1-210ENST00000528441 SIPA1L1O43166 1804 aa10.9□□□□□ -0.66
CMTM1-210ENST00000528441 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.67
CMTM1-210ENST00000528441 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 PHIPQ8WWQ0 1821 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 MINDY4BA8MYZ0 360 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 PRKAB2O43741 272 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 ZFYP08048 801 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-210ENST00000528441 CYP2D6P10635 497 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 PLCD1P51178 756 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 BACE1P56817 501 aa10.89□□□□□ -0.67
CMTM1-210ENST00000528441 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms