RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 IRF5Q13568 498 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 NKX2-3Q8TAU0 364 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 PXYLP1Q8TE99 480 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 DPF3Q92784 378 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 COA7Q96BR5 231 aa18.95■□□□□ 0.62
CLNS1A-210ENST00000528364 SGPL1O95470 568 aa18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 GCLCP48506 637 aaPredicted RBP18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 PABPC4Q13310 644 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 GJD2Q9UKL4 321 aa18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 ZBTB21Q9ULJ3 1066 aa18.94■□□□□ 0.62
CLNS1A-210ENST00000528364 MAST2Q6P0Q8 1798 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 USP5P45974 858 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 SIRT2Q8IXJ6 389 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 DEFB118Q96PH6 123 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 TMOD4Q9NZQ9 345 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 TRIOBPQ9H2D6 2365 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 LOC285556D6RIA3 1793 aa18.93■□□□□ 0.62
CLNS1A-210ENST00000528364 USP17L10C9JJH3 530 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 IGSF3O75054 1194 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 GH2P01242 217 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 IRX3P78415 501 aaPredicted RBP18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 TRIM32Q13049 653 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 TXNRD2Q9NNW7 524 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 EMILIN3Q9NT22 766 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 PCDH10Q9P2E7 1040 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 FOCADQ5VW36 1801 aa18.92■□□□□ 0.62
CLNS1A-210ENST00000528364 C19orf81C9J6K1 198 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 FARP2O94887 1054 aaPredicted RBP18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 TFRCP02786 760 aaKnown RBP18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 HOXA7P31268 230 aaPredicted RBP18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 Q3C1V9 767 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 POTEEQ6S8J3 1075 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 MORF4L1Q9UBU8 362 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 MYH1P12882 1939 aa18.91■□□□□ 0.62
CLNS1A-210ENST00000528364 EVX2Q03828 476 aa18.9■□□□□ 0.62
CLNS1A-210ENST00000528364 RIOK1Q9BRS2 568 aaKnown RBP18.9■□□□□ 0.62
CLNS1A-210ENST00000528364 RBPJLQ9UBG7 517 aa18.9■□□□□ 0.62
CLNS1A-210ENST00000528364 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 PLCD1P51178 756 aa18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 HERVK_113P62684 666 aa18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 ZYXQ15942 572 aaKnown RBP18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 TATDN1Q6P1N9 297 aa18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 EDC3Q96F86 508 aaKnown RBP18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 PAK6Q9NQU5 681 aaPredicted RBP18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 ZBTB40Q9NUA8 1239 aa18.89■□□□□ 0.61
CLNS1A-210ENST00000528364 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 PDE6AP16499 860 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 CYP2B6P20813 491 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 HSP90AB4PQ58FF6 505 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 USP17L2Q6R6M4 530 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 CHRDL2Q6WN34 429 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 GPRC5AQ8NFJ5 357 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 ACER1Q8TDN7 264 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 SERPINB13Q9UIV8 391 aa18.88■□□□□ 0.61
CLNS1A-210ENST00000528364 GOLIM4O00461 696 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 MS4A1P11836 297 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 RAB3GAP1Q15042 981 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 CERKLQ49MI3 558 aaPredicted RBP18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 TTC6Q86TZ1 520 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 DNAJC2Q99543 621 aaKnown RBP18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 PAGR1Q9BTK6 254 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 HTATIP2Q9BUP3 242 aa18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLNS1A-210ENST00000528364 ZNF532Q9HCE3 1301 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 HMGCRP04035 888 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 IFIT2P09913 472 aaKnown RBP18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 SHMT1P34896 483 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 DIS3LQ8TF46 1054 aaKnown RBP18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 TRIB2Q92519 343 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 KIF1BPQ96EK5 621 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 PAWRQ96IZ0 340 aaKnown RBP18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 EHD4Q9H223 541 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 PORCNQ9H237 461 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 PLXNB2O15031 1838 aa18.86■□□□□ 0.61
CLNS1A-210ENST00000528364 POLR3DP05423 398 aaPredicted RBP18.85■□□□□ 0.61
CLNS1A-210ENST00000528364 GUCY1A2P33402 732 aa18.85■□□□□ 0.61
CLNS1A-210ENST00000528364 TTF1Q15361 905 aaPredicted RBP18.85■□□□□ 0.61
CLNS1A-210ENST00000528364 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
CLNS1A-210ENST00000528364 DDX19BQ9UMR2 479 aa18.85■□□□□ 0.61
CLNS1A-210ENST00000528364 TCRBV5S4A2TA0A5A2 114 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 CNMDO75829 334 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 CYP2D6P10635 497 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 ERVK-9P63128 1117 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 ERVK-24P63145 666 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 LCORLQ8N3X6 602 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms