RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 PTPRAP18433 802 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 ECE1P42892 770 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 CDK8P49336 464 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 ALX1Q15699 326 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 ERO1BQ86YB8 467 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 MS4A4AQ96JQ5 239 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 NAPBQ9H115 298 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 CSADQ9Y600 493 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 IRF6O14896 467 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 AKR1B1P15121 316 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 PPARAQ07869 468 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 NOGQ13253 232 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 DGKZQ13574 1117 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 MOGSQ13724 837 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 CLEC10AQ8IUN9 316 aa15.38■□□□□ 0.05
SCN3B-205ENST00000528267 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCN3B-205ENST00000528267 PRDM1O75626 825 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 GH2P01242 217 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 ZBTB48P10074 688 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-205ENST00000528267 PPATQ06203 517 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 PPIL2Q13356 520 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 PTPN18Q99952 460 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 ESYT1Q9BSJ8 1104 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCN3B-205ENST00000528267 AFG3L2Q9Y4W6 797 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
SCN3B-205ENST00000528267 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCN3B-205ENST00000528267 RASA1P20936 1047 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 MAP2K2P36507 400 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 HAND2P61296 217 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 CERKLQ49MI3 558 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-205ENST00000528267 TBC1D10CQ8IV04 446 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 LSG1Q9H089 658 aaKnown RBP15.36■□□□□ 0.05
SCN3B-205ENST00000528267 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 KCNH4Q9UQ05 1017 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 ZHX2Q9Y6X8 837 aa15.36■□□□□ 0.05
SCN3B-205ENST00000528267 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-205ENST00000528267 SEPT2Q15019 361 aa15.35■□□□□ 0.05
SCN3B-205ENST00000528267 SIAH1Q8IUQ4 282 aa15.35■□□□□ 0.05
SCN3B-205ENST00000528267 DDRGK1Q96HY6 314 aa15.35■□□□□ 0.05
SCN3B-205ENST00000528267 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
SCN3B-205ENST00000528267 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
SCN3B-205ENST00000528267 CDC45O75419 566 aa15.34■□□□□ 0.05
SCN3B-205ENST00000528267 FGRP09769 529 aa15.34■□□□□ 0.05
SCN3B-205ENST00000528267 ABCB5Q2M3G0 1257 aa15.34■□□□□ 0.05
SCN3B-205ENST00000528267 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
SCN3B-205ENST00000528267 WBP1LQ9NX94 342 aa15.34■□□□□ 0.05
SCN3B-205ENST00000528267 A0A0G2JLL6 359 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-205ENST00000528267 A0A1W2PRG0 241 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 ASNSP08243 561 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 TM4SF4P48230 202 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 MFAP1P55081 439 aaKnown RBP15.33■□□□□ 0.04
SCN3B-205ENST00000528267 PRRT2Q7Z6L0 340 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-205ENST00000528267 AMOTL1Q8IY63 956 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 FAM43AQ8N2R8 423 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 RUFY2Q8WXA3 655 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 NEDD4P46934 1319 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 PARP14Q460N5 1801 aa15.33■□□□□ 0.04
SCN3B-205ENST00000528267 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 TRIM75PA6NK02 468 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 SPP2Q13103 211 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-205ENST00000528267 CCL15Q16663 113 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 FAM47AQ5JRC9 791 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 GPAT2Q6NUI2 795 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 MAP4K1Q92918 833 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 WDR18Q9BV38 432 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 R3HDMLQ9H3Y0 253 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 PLIN4Q96Q06 1357 aa15.32■□□□□ 0.04
SCN3B-205ENST00000528267 RLFQ13129 1914 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 MANSC4A6NHS7 340 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-205ENST00000528267 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
SCN3B-205ENST00000528267 CYP21A2P08686 494 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 HSPA1AP0DMV8 641 aaKnown RBP15.31■□□□□ 0.04
SCN3B-205ENST00000528267 HSPA1BP0DMV9 641 aaKnown RBP15.31■□□□□ 0.04
SCN3B-205ENST00000528267 GTF2A2P52657 109 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 MTMR2Q13614 643 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 RAB3GAP1Q15042 981 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 KIAA1755Q5JYT7 1200 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 STOX1Q6ZVD7 989 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 GINM1Q9NU53 330 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 TSKSQ9UJT2 592 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 ZSWIM8A7E2V4 1837 aa15.31■□□□□ 0.04
SCN3B-205ENST00000528267 CXCL11O14625 94 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms