RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
MSRA-210ENST00000528246 SMARCE1Q969G3 411 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 UTP14AQ9BVJ6 771 aaKnown RBP11.74□□□□□ -0.53
MSRA-210ENST00000528246 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 MAN1B1Q9UKM7 699 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 NR1I3Q14994 352 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 FAM196AQ6ZSG2 479 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
MSRA-210ENST00000528246 IFNL3Q8IZI9 196 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 TC2NQ8N9U0 490 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 DPF2Q92785 391 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 RNF26Q9BY78 433 aaPredicted RBP11.74□□□□□ -0.53
MSRA-210ENST00000528246 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
MSRA-210ENST00000528246 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.53
MSRA-210ENST00000528246 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
MSRA-210ENST00000528246 B4E1Z4 1266 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 XBP1P17861 261 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 BMP6P22004 513 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
MSRA-210ENST00000528246 CASQ1P31415 396 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 CYP2C19P33261 490 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
MSRA-210ENST00000528246 FERMT2Q96AC1 680 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 NAPBQ9H115 298 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 NFE2L3Q9Y4A8 694 aa11.73□□□□□ -0.53
MSRA-210ENST00000528246 IFIT3O14879 490 aaKnown RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 TOB1P50616 345 aaPredicted RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 RTN1Q16799 776 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 DIS3L2Q8IYB7 885 aaKnown RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 CRACR2BQ8N4Y2 399 aaPredicted RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 PHKBQ93100 1093 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 GSDMAQ96QA5 445 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 THRAP3Q9Y2W1 955 aaKnown RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 ERICH2A1L162 156 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 CCDC151A5D8V7 595 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
MSRA-210ENST00000528246 APPP05067 770 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 CCDC175P0C221 793 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 SLC5A1P13866 664 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 BRD3Q15059 726 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 SH3RF1Q7Z6J0 888 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 AIFM3Q96NN9 605 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 SLC26A6Q9BXS9 759 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 GREM2Q9H772 168 aa11.72□□□□□ -0.53
MSRA-210ENST00000528246 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSRA-210ENST00000528246 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.54
MSRA-210ENST00000528246 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.54
MSRA-210ENST00000528246 ZBTB22O15209 634 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 PPFIA3O75145 1194 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 PBX1P40424 430 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 PLA2G4AP47712 749 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 TRIM14Q14142 442 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 WTAPQ15007 396 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 EZH2Q15910 746 aaKnown RBP11.71□□□□□ -0.54
MSRA-210ENST00000528246 PI16Q6UXB8 463 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 GOLGA1Q92805 767 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 CLIC6Q96NY7 704 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 EPB41L4AQ9HCS5 686 aaPredicted RBP11.71□□□□□ -0.54
MSRA-210ENST00000528246 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.54
MSRA-210ENST00000528246 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
MSRA-210ENST00000528246 RREB1Q92766 1687 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 LRRC10BA6NIK2 292 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 BTBD18B2RXH4 712 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 APBA3O96018 575 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CALM1P0DP23 149 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CALM2P0DP24 149 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CALM3P0DP25 149 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
MSRA-210ENST00000528246 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
MSRA-210ENST00000528246 PDE4BQ07343 736 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
MSRA-210ENST00000528246 CNGA4Q8IV77 575 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms