RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 MINDY4BA8MYZ0 360 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 ASNSP08243 561 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 CETPP11597 493 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 CTCFP49711 727 aaPredicted RBP19.77■□□□□ 0.76
SSH3-205ENST00000527821 SBK1Q52WX2 424 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 CWC27Q6UX04 472 aaKnown RBP19.77■□□□□ 0.76
SSH3-205ENST00000527821 IFNL1Q8IU54 200 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 DYNLL2Q96FJ2 89 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 NAPBQ9H115 298 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 SWAP70Q9UH65 585 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 TSKSQ9UJT2 592 aa19.77■□□□□ 0.76
SSH3-205ENST00000527821 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
SSH3-205ENST00000527821 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 SHMT1P34896 483 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 MFAP1P55081 439 aaKnown RBP19.76■□□□□ 0.75
SSH3-205ENST00000527821 OTUD7BQ6GQQ9 843 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 SLC44A5Q8NCS7 719 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 BRI3BPQ8WY22 251 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 GINM1Q9NU53 330 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 SAGE1Q9NXZ1 904 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 ZBTB21Q9ULJ3 1066 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 KCNH4Q9UQ05 1017 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 AFG3L2Q9Y4W6 797 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 MYH8P13535 1937 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 PHIPQ8WWQ0 1821 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 CCDC171Q6TFL3 1326 aa19.76■□□□□ 0.75
SSH3-205ENST00000527821 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 SMIM22K7EJ46 135 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 IGF2BP3O00425 579 aaKnown RBP eCLIP19.75■□□□□ 0.75
SSH3-205ENST00000527821 CXCL11O14625 94 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 ALDH1A1P00352 501 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 GH2P01242 217 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 JAG1P78504 1218 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 ABCB5Q2M3G0 1257 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 SHROOM1Q2M3G4 852 aaPredicted RBP19.75■□□□□ 0.75
SSH3-205ENST00000527821 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 ZNF589Q86UQ0 364 aaPredicted RBP19.75■□□□□ 0.75
SSH3-205ENST00000527821 PTPN18Q99952 460 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 TBC1D2Q9BYX2 928 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 AS3MTQ9HBK9 375 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 CABP5Q9NP86 173 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 TAOK2Q9UL54 1235 aa19.75■□□□□ 0.75
SSH3-205ENST00000527821 HSPA8P11142 646 aaKnown RBP19.74■□□□□ 0.75
SSH3-205ENST00000527821 CDK8P49336 464 aa19.74■□□□□ 0.75
SSH3-205ENST00000527821 C16orf86Q6ZW13 317 aa19.74■□□□□ 0.75
SSH3-205ENST00000527821 STK11IPQ8N1F8 1099 aa19.74■□□□□ 0.75
SSH3-205ENST00000527821 ZNF280CQ8ND82 737 aa19.74■□□□□ 0.75
SSH3-205ENST00000527821 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
SSH3-205ENST00000527821 LBX1P52954 281 aa19.73■□□□□ 0.75
SSH3-205ENST00000527821 SPP2Q13103 211 aa19.73■□□□□ 0.75
SSH3-205ENST00000527821 RAB3GAP1Q15042 981 aa19.73■□□□□ 0.75
SSH3-205ENST00000527821 FOXP2O15409 715 aa19.72■□□□□ 0.75
SSH3-205ENST00000527821 TBC1D8O95759 1140 aa19.72■□□□□ 0.75
SSH3-205ENST00000527821 A0A0G2JLL6 359 aaPredicted RBP19.71■□□□□ 0.75
SSH3-205ENST00000527821 BTBD19C9JJ37 291 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 HSPD1P10809 573 aaKnown RBP19.71■□□□□ 0.75
SSH3-205ENST00000527821 GADL1Q6ZQY3 521 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 FASTKD5Q7L8L6 764 aaKnown RBP19.71■□□□□ 0.75
SSH3-205ENST00000527821 PRRT2Q7Z6L0 340 aaPredicted RBP19.71■□□□□ 0.75
SSH3-205ENST00000527821 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 CCDC17Q96LX7 622 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 WDR18Q9BV38 432 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 MKNK2Q9HBH9 465 aa19.71■□□□□ 0.75
SSH3-205ENST00000527821 PTPRFP10586 1907 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 ROBO3Q96MS0 1386 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 SLC3A2P08195 630 aaKnown RBP19.7■□□□□ 0.74
SSH3-205ENST00000527821 CHMLP26374 656 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 PPARAQ07869 468 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 ALX1Q15699 326 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 ZNF287Q9HBT7 754 aa19.7■□□□□ 0.74
SSH3-205ENST00000527821 FGAP02671 866 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 AKR1B1P15121 316 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 MOGSQ13724 837 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 SEPT2Q15019 361 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 TAF1CQ15572 869 aaPredicted RBP19.69■□□□□ 0.74
SSH3-205ENST00000527821 TMEM179Q6ZVK1 233 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 ANKRD23Q86SG2 305 aa19.69■□□□□ 0.74
SSH3-205ENST00000527821 USP17L10C9JJH3 530 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 GUCY1A2P33402 732 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 HMGCS2P54868 508 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 BACE1P56817 501 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 PDE4BQ07343 736 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 MTMR2Q13614 643 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 BMP2KLQ5H9B9 411 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 FEZ1Q99689 392 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 CFHR5Q9BXR6 569 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 ZCCHC17Q9NP64 241 aaKnown RBP19.68■□□□□ 0.74
SSH3-205ENST00000527821 RAD50Q92878 1312 aa19.68■□□□□ 0.74
SSH3-205ENST00000527821 C19orf81C9J6K1 198 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 PDHXO00330 501 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 RASA1P20936 1047 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 CTDSPL2Q05D32 466 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 CRHR2Q13324 411 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 GPAT2Q6NUI2 795 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 ZNF444Q8N0Y2 327 aaPredicted RBP19.67■□□□□ 0.74
SSH3-205ENST00000527821 ZFYVE28Q9HCC9 887 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 PRDM10Q9NQV6 1147 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 TMOD4Q9NZQ9 345 aa19.67■□□□□ 0.74
SSH3-205ENST00000527821 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms