RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 A0A0G2JLL6 359 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-209ENST00000527469 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 USP17L21D6R901 530 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 M0R2C6 588 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 PDHXO00330 501 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 GH2P01242 217 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 CYP2D6P10635 497 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 DGKZQ13574 1117 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
CAPN1-209ENST00000527469 RAB3GAP1Q15042 981 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
CAPN1-209ENST00000527469 PRRT2Q7Z6L0 340 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-209ENST00000527469 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 ARPP21Q9UBL0 812 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-209ENST00000527469 LAMB1P07942 1786 aa16.03■□□□□ 0.16
CAPN1-209ENST00000527469 ZMYM1Q5SVZ6 1142 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 TATDN1Q6P1N9 297 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 PARK7Q99497 189 aaKnown RBP16.02■□□□□ 0.16
CAPN1-209ENST00000527469 FEZ1Q99689 392 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 SIPA1L1O43166 1804 aa16.02■□□□□ 0.16
CAPN1-209ENST00000527469 CYP2D7A0A087X1C5 515 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-209ENST00000527469 SHMT1P34896 483 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 HMGCS2P54868 508 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 PABPC4Q13310 644 aaKnown RBP eCLIP16.01■□□□□ 0.15
CAPN1-209ENST00000527469 C12orf60Q5U649 245 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
CAPN1-209ENST00000527469 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 ERO1AQ96HE7 468 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 OSBPL3Q9H4L5 887 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
CAPN1-209ENST00000527469 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
CAPN1-209ENST00000527469 SP3Q02447 781 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 MTMR2Q13614 643 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 KIF22Q14807 665 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 ARHGEF6Q15052 776 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
CAPN1-209ENST00000527469 SMCR8Q8TEV9 937 aaPredicted RBP16■□□□□ 0.15
CAPN1-209ENST00000527469 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 SEC62Q99442 399 aaKnown RBP16■□□□□ 0.15
CAPN1-209ENST00000527469 PNMA3Q9UL41 463 aa16■□□□□ 0.15
CAPN1-209ENST00000527469 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
CAPN1-209ENST00000527469 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 TLR2O60603 784 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
CAPN1-209ENST00000527469 BACE1P56817 501 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 GABPAQ06546 454 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-209ENST00000527469 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 MCOLN1Q9GZU1 580 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 NAPBQ9H115 298 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 DIAPH3Q9NSV4 1193 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
CAPN1-209ENST00000527469 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
CAPN1-209ENST00000527469 C19orf81C9J6K1 198 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 HIP1O00291 1037 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 CDK8P49336 464 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
CAPN1-209ENST00000527469 JAG1P78504 1218 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 EVX2Q03828 476 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 MOGSQ13724 837 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 GPAT2Q6NUI2 795 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 SLC45A1Q9Y2W3 748 aa15.98■□□□□ 0.15
CAPN1-209ENST00000527469 CAPN15O75808 1086 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 CYP2C8P10632 490 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 OSBPP22059 807 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-209ENST00000527469 PKN2Q16513 984 aaKnown RBP15.97■□□□□ 0.15
CAPN1-209ENST00000527469 MCMDC2Q4G0Z9 681 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 TMEM179Q6ZVK1 233 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 IFNL3Q8IZI9 196 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 CPA4Q9UI42 421 aa15.97■□□□□ 0.15
CAPN1-209ENST00000527469 PHIPQ8WWQ0 1821 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 PDE4AP27815 886 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 USP14P54578 494 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 IRX3P78415 501 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-209ENST00000527469 SEPT2Q15019 361 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 ZYXQ15942 572 aaKnown RBP15.96■□□□□ 0.15
CAPN1-209ENST00000527469 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
CAPN1-209ENST00000527469 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms