RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 SPP2Q13103 211 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 SLC4A8Q2Y0W8 1093 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 GPAT2Q6NUI2 795 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 CHD1LQ86WJ1 897 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-229ENST00000527464 STRBPQ96SI9 672 aaKnown RBP20.29■□□□□ 0.84
NR1H3-229ENST00000527464 LNPKQ9C0E8 428 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
NR1H3-229ENST00000527464 BAZ2AQ9UIF9 1905 aaKnown RBP20.28■□□□□ 0.84
NR1H3-229ENST00000527464 ARHGEF6Q15052 776 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 SH3D19Q5HYK7 790 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 GIMAP6Q6P9H5 292 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 CCDC84Q86UT8 332 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-229ENST00000527464 OSBP2Q969R2 916 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 PARK7Q99497 189 aaKnown RBP20.28■□□□□ 0.84
NR1H3-229ENST00000527464 FSD1Q9BTV5 496 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-229ENST00000527464 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
NR1H3-229ENST00000527464 GDF11O95390 407 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 GNAT2P19087 354 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-229ENST00000527464 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 EVI5LQ96CN4 794 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 AGTPBP1Q9UPW5 1226 aa20.27■□□□□ 0.84
NR1H3-229ENST00000527464 C19orf81C9J6K1 198 aa20.26■□□□□ 0.83
NR1H3-229ENST00000527464 SHMT1P34896 483 aa20.26■□□□□ 0.83
NR1H3-229ENST00000527464 JAG1P78504 1218 aa20.26■□□□□ 0.83
NR1H3-229ENST00000527464 C12orf60Q5U649 245 aa20.26■□□□□ 0.83
NR1H3-229ENST00000527464 CABP5Q9NP86 173 aa20.26■□□□□ 0.83
NR1H3-229ENST00000527464 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 USP17L21D6R901 530 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 GH2P01242 217 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 BACE1P56817 501 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 PABPC4Q13310 644 aaKnown RBP eCLIP20.25■□□□□ 0.83
NR1H3-229ENST00000527464 ABCB5Q2M3G0 1257 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 OSBPL3Q9H4L5 887 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 LOC285556D6RIA3 1793 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 ADGRA2Q96PE1 1338 aa20.25■□□□□ 0.83
NR1H3-229ENST00000527464 USP17L10C9JJH3 530 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 GPAA1O43292 621 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 HMGCS2P54868 508 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
NR1H3-229ENST00000527464 SBK1Q52WX2 424 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 FBXO46Q6PJ61 603 aaPredicted RBP20.24■□□□□ 0.83
NR1H3-229ENST00000527464 CD99L2Q8TCZ2 262 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
NR1H3-229ENST00000527464 PNMA3Q9UL41 463 aa20.24■□□□□ 0.83
NR1H3-229ENST00000527464 GSG1L2A8MUP6 293 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 CYP2D6P10635 497 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 KIF22Q14807 665 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 CTR9Q6PD62 1173 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 EFCC1Q9HA90 598 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 TRIM17Q9Y577 477 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 MYH8P13535 1937 aa20.23■□□□□ 0.83
NR1H3-229ENST00000527464 GNRH1P01148 92 aa20.22■□□□□ 0.83
NR1H3-229ENST00000527464 MTMR2Q13614 643 aa20.22■□□□□ 0.83
NR1H3-229ENST00000527464 SHROOM1Q2M3G4 852 aaPredicted RBP20.22■□□□□ 0.83
NR1H3-229ENST00000527464 PLEKHM2Q8IWE5 1019 aa20.22■□□□□ 0.83
NR1H3-229ENST00000527464 CCDC17Q96LX7 622 aa20.22■□□□□ 0.83
NR1H3-229ENST00000527464 PATL2C9JE40 543 aaKnown RBP20.21■□□□□ 0.83
NR1H3-229ENST00000527464 M0R2C6 588 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 CYP2C8P10632 490 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 BCRP11274 1271 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 LACTBP83111 547 aaPredicted RBP20.21■□□□□ 0.83
NR1H3-229ENST00000527464 TREML2Q5T2D2 321 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 USP17L2Q6R6M4 530 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 C16orf86Q6ZW13 317 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 NACAP1Q9BZK3 213 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 CPA4Q9UI42 421 aa20.21■□□□□ 0.83
NR1H3-229ENST00000527464 CAPN15O75808 1086 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 OSBPP22059 807 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
NR1H3-229ENST00000527464 CDK8P49336 464 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 USP14P54578 494 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 EVX2Q03828 476 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 SMCR8Q8TEV9 937 aaPredicted RBP20.2■□□□□ 0.82
NR1H3-229ENST00000527464 DYNLL2Q96FJ2 89 aa20.2■□□□□ 0.82
NR1H3-229ENST00000527464 CYP2D7A0A087X1C5 515 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 GUCY1A2P33402 732 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 SLC44A5Q8NCS7 719 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 C12orf42Q96LP6 360 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 SEC62Q99442 399 aaKnown RBP20.19■□□□□ 0.82
NR1H3-229ENST00000527464 FEZ1Q99689 392 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 KIAA1683Q9H0B3 1180 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 HELLSQ9NRZ9 838 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 HPS5Q9UPZ3 1129 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 PTPN22Q9Y2R2 807 aa20.19■□□□□ 0.82
NR1H3-229ENST00000527464 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
NR1H3-229ENST00000527464 MPHOSPH10O00566 681 aaKnown RBP20.18■□□□□ 0.82
NR1H3-229ENST00000527464 APPP05067 770 aa20.18■□□□□ 0.82
NR1H3-229ENST00000527464 GCLCP48506 637 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms